RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CAPN9O14815 690 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 AFPP02771 609 aaKnown RBP4.98□□□□□ -1.61
CHD9-221ENST00000615216 ABCB4P21439 1286 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 PDIA3P30101 505 aaKnown RBP4.98□□□□□ -1.61
CHD9-221ENST00000615216 PSMC2P35998 433 aaKnown RBP4.98□□□□□ -1.61
CHD9-221ENST00000615216 PTH1RQ03431 593 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 SLC39A14Q15043 492 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 HSP90AA5PQ58FG0 334 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 XKR9Q5GH70 373 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 MIS18BP1Q6P0N0 1132 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 CACTINQ8WUQ7 758 aaKnown RBP4.98□□□□□ -1.61
CHD9-221ENST00000615216 DDX27Q96GQ7 796 aaKnown RBP4.98□□□□□ -1.61
CHD9-221ENST00000615216 ACCSQ96QU6 501 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 USP28Q96RU2 1077 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 DESI2Q9BSY9 194 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 USP44Q9H0E7 712 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 CCDC68Q9H2F9 335 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 NRBP2Q9NSY0 501 aa4.98□□□□□ -1.61
CHD9-221ENST00000615216 FRMPD1Q5SYB0 1578 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 BCORL1Q5H9F3 1711 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ICA1Q05084 483 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 PTGDRQ13258 359 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 PPP2R5DQ14738 602 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 CCDC93Q567U6 631 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.97□□□□□ -1.61
CHD9-221ENST00000615216 LARP4BQ92615 738 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 CCDC17Q96LX7 622 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 LRGUKQ96M69 825 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 DIS3Q9Y2L1 958 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 ARHGEF37A1IGU5 675 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 TMEM191BP0C7N4 346 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 POLR2FP61218 127 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 TCP10Q12799 353 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 CUL1Q13616 776 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 NXNQ6DKJ4 435 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ARMCX5Q6P1M9 558 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 EFCAB13Q8IY85 973 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 PLCD3Q8N3E9 789 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 FBXO18Q8NFZ0 1043 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 TMEM206Q9H813 350 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 SEPT10Q9P0V9 454 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 LEMD3Q9Y2U8 911 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ABCA6Q8N139 1617 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ABCC3O15438 1527 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ARAP3Q8WWN8 1544 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 USP6P35125 1406 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 M0R2C6 588 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 TLR3O15455 904 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 ZBTB24O43167 697 aaPredicted RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 SART1O43290 800 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 PPIP5K2O43314 1243 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 PTK2Q05397 1052 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ZYXQ15942 572 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 MAN2A1Q16706 1144 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 FAM26FQ5R3K3 315 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 POMGNT1Q8WZA1 660 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ZNF496Q96IT1 587 aaPredicted RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 FANCLQ9NW38 375 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 TYW5A2RUC4 315 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 PGRMC1O00264 195 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 MGEA5O60502 916 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 GSTA1P08263 222 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 GSTA2P09210 222 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 BTDP43251 543 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 USP14P54578 494 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 IRX5P78411 483 aaPredicted RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 LRMPQ12912 555 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 FNBP4Q8N3X1 1017 aaPredicted RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 FBXO41Q8TF61 875 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 NT5C1BQ96P26 610 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 TUBGCP2Q9BSJ2 902 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 RABEP2Q9H5N1 569 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 MLXIPQ9HAP2 919 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 BAG5Q9UL15 447 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 TESPA1A2RU30 521 aaPredicted RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 WDR46O15213 610 aaKnown RBP4.97□□□□□ -1.61
CHD9-221ENST00000615216 RNF8O76064 485 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 TTC4O95801 387 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 A1BGP04217 495 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 INHBAP08476 426 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 SLMAPQ14BN4 828 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 ABCB5Q2M3G0 1257 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 PCDHB4Q9Y5E5 795 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 USP17L12C9JPN9 530 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 USP17L21D6R901 530 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 MCF2LO15068 1137 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 OPHN1O60890 802 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 FGAP02671 866 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 SURF1Q15526 300 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 LRCH2Q5VUJ6 765 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 KRT39Q6A163 491 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 PLA2G4DQ86XP0 818 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 RASEFQ8IZ41 740 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 CPXCR1Q8N123 301 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 MAP4K1Q92918 833 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 CDHR1Q96JP9 859 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 WDR11Q9BZH6 1224 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 EFCC1Q9HA90 598 aa4.97□□□□□ -1.61
CHD9-221ENST00000615216 CLIC4Q9Y696 253 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms