RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 SMARCC2Q8TAQ2 1214 aa20.85■□□□□ 0.93
IGHV3-41-201ENST00000613121 TSEN34Q9BSV6 310 aaKnown RBP20.85■□□□□ 0.93
IGHV3-41-201ENST00000613121 UPF3BQ9BZI7 483 aaKnown RBP20.85■□□□□ 0.93
IGHV3-41-201ENST00000613121 PXMP2Q9NR77 195 aa20.85■□□□□ 0.93
IGHV3-41-201ENST00000613121 V9GY48 417 aaPredicted RBP20.85■□□□□ 0.93
IGHV3-41-201ENST00000613121 NR3C2P08235 984 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 EDNRBP24530 442 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 CDC27P30260 824 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 ACLYP53396 1101 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 RCAN1P53805 252 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 TLK2Q86UE8 772 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 FBXL16Q8N461 479 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 KLHDC9Q8NEP7 349 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 SCFD2Q8WU76 684 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 PDRG1Q9NUG6 133 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 PHF24Q9UPV7 400 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 GNEQ9Y223 722 aaKnown RBP20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 Q9Y3F1 56 aa20.84■□□□□ 0.93
IGHV3-41-201ENST00000613121 ZNFX1Q9P2E3 1918 aaKnown RBP20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 MYADML2A6NDP7 307 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 MOXD2PA6NHM9 499 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 ZEB2O60315 1214 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 EIF3JO75822 258 aaKnown RBP20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 TXNP10599 105 aaKnown RBP20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 IRX5P78411 483 aaPredicted RBP20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 BEX3Q00994 111 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 GHRHRQ02643 423 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 DUSP28Q4G0W2 176 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 TMEM63BQ5T3F8 832 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 GLT1D1Q96MS3 346 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 PSTPIP2Q9H939 334 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 STARD7Q9NQZ5 370 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 ATP11BQ9Y2G3 1177 aa20.83■□□□□ 0.93
IGHV3-41-201ENST00000613121 RBM47A0AV96 593 aaKnown RBP20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 ASGR1P07306 291 aa20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 RTP1P59025 263 aa20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 CCT2P78371 535 aaKnown RBP20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 TTLL4Q14679 1199 aa20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 AGXT2Q9BYV1 514 aa20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 UPF3AQ9H1J1 476 aaKnown RBP20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 FAM217BQ9NTX9 383 aaPredicted RBP20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 ZMYND8Q9ULU4 1186 aaPredicted RBP20.82■□□□□ 0.92
IGHV3-41-201ENST00000613121 A0A1W2PQ45 241 aaPredicted RBP20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 A0A1W2PQY0 241 aa20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 PTGS1P23219 599 aa20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 FSCN1Q16658 493 aaKnown RBP20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 USP17L6PQ6QN14 398 aa20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 OR6J1Q8NGC5 347 aa20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 GPKOWQ92917 476 aaPredicted RBP eCLIP20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 PDCD2LQ9BRP1 358 aa20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 LARP6Q9BRS8 491 aaKnown RBP20.81■□□□□ 0.92
IGHV3-41-201ENST00000613121 NKRFO15226 690 aaKnown RBP eCLIP20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 SEC24BO95487 1268 aa20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 SYN1P17600 705 aa20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 CST5P28325 142 aaPredicted RBP20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 PDIA3P30101 505 aaKnown RBP20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 CCND2P30279 289 aa20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 NAPAP54920 295 aa20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 ANAPC15P60006 121 aa20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 TOB2Q14106 344 aaPredicted RBP20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 PGM5Q15124 567 aa20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 BRDTQ58F21 947 aaPredicted RBP20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 CCSAPQ6IQ19 270 aaPredicted RBP20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 PRKAG2Q9UGJ0 569 aa20.8■□□□□ 0.92
IGHV3-41-201ENST00000613121 CNTNAP5Q8WYK1 1306 aa20.79■□□□□ 0.92
IGHV3-41-201ENST00000613121 COPS5Q92905 334 aa20.79■□□□□ 0.92
IGHV3-41-201ENST00000613121 ZFP91Q96JP5 570 aaPredicted RBP20.79■□□□□ 0.92
IGHV3-41-201ENST00000613121 MRVI1Q9Y6F6 885 aa20.79■□□□□ 0.92
IGHV3-41-201ENST00000613121 CPT1AP50416 773 aa20.78■□□□□ 0.92
IGHV3-41-201ENST00000613121 NKX3-2P78367 333 aa20.78■□□□□ 0.92
IGHV3-41-201ENST00000613121 FUT2Q10981 343 aa20.78■□□□□ 0.92
IGHV3-41-201ENST00000613121 LY6KQ17RY6 165 aa20.78■□□□□ 0.92
IGHV3-41-201ENST00000613121 TRIM60Q495X7 471 aa20.78■□□□□ 0.92
IGHV3-41-201ENST00000613121 WWC2Q6AWC2 1192 aa20.78■□□□□ 0.92
IGHV3-41-201ENST00000613121 VSIG10LQ86VR7 867 aa20.78■□□□□ 0.92
IGHV3-41-201ENST00000613121 PLXNA1Q9UIW2 1896 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 PIK3CDO00329 1044 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 MEIS2O14770 477 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 CTAGE5O15320 804 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 EVCP57679 992 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 STK3Q13188 491 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 CXCL17Q6UXB2 119 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 ZNF274Q96GC6 653 aaPredicted RBP20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 PRDM5Q9NQX1 630 aaPredicted RBP20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 RTEL1Q9NZ71 1219 aa20.77■□□□□ 0.92
IGHV3-41-201ENST00000613121 ELP1O95163 1332 aa20.77■□□□□ 0.91
IGHV3-41-201ENST00000613121 MKI67P46013 3256 aaKnown RBP20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 SMCO2A6NFE2 343 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 SPDYE3A6NKU9 549 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 hCG_1984214I3L0E3 225 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 CPLX1O14810 134 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 PRPF3O43395 683 aaKnown RBP20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 PPFIA3O75145 1194 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 CABYRO75952 493 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 ARIH2O95376 493 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 GH1P01241 217 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 MYL3P08590 195 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 TLE2Q04725 743 aa20.76■□□□□ 0.91
IGHV3-41-201ENST00000613121 UBE2SQ16763 222 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms