RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 GLT8D2Q9H1C3 349 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 CCDC194A0A1B0GVG4 234 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 SPDYE3A6NKU9 549 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 ZNF792Q3KQV3 632 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 USP6NLQ92738 828 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 MAP3K20Q9NYL2 800 aaKnown RBP13.78□□□□□ -0.2
CLK4-215ENST00000611733 CHMP5Q9NZZ3 219 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 PFASO15067 1338 aa13.78□□□□□ -0.2
CLK4-215ENST00000611733 SLC15A5A6NIM6 579 aa13.77□□□□□ -0.21
CLK4-215ENST00000611733 FKTNO75072 461 aa13.77□□□□□ -0.21
CLK4-215ENST00000611733 FCGRTP55899 365 aa13.77□□□□□ -0.21
CLK4-215ENST00000611733 NUCB2P80303 420 aa13.77□□□□□ -0.21
CLK4-215ENST00000611733 NONOQ15233 471 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLK4-215ENST00000611733 KRT25Q7Z3Z0 450 aa13.77□□□□□ -0.21
CLK4-215ENST00000611733 ABRAQ8N0Z2 381 aa13.77□□□□□ -0.21
CLK4-215ENST00000611733 FTOQ9C0B1 505 aaKnown RBP eCLIP13.77□□□□□ -0.21
CLK4-215ENST00000611733 PXMP2Q9NR77 195 aa13.77□□□□□ -0.21
CLK4-215ENST00000611733 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
CLK4-215ENST00000611733 FOSP01100 380 aaPredicted RBP13.76□□□□□ -0.21
CLK4-215ENST00000611733 CYP2B6P20813 491 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 AP3B2Q13367 1082 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 ARHGEF16Q5VV41 709 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 DPP9Q86TI2 863 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 SAMD3Q8N6K7 520 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 CRYGNQ8WXF5 182 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 RPTORQ8N122 1335 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 DOCK3Q8IZD9 2030 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 LCTP09848 1927 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 FOXN1O15353 648 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 MAP2K5Q13163 448 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 PGM5Q15124 567 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 CCL14Q16627 93 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 UIMC1Q96RL1 719 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 PDCD2LQ9BRP1 358 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 FLRT1Q9NZU1 646 aa13.76□□□□□ -0.21
CLK4-215ENST00000611733 TFIP11Q9UBB9 837 aaKnown RBP13.76□□□□□ -0.21
CLK4-215ENST00000611733 MYCLP12524 364 aaPredicted RBP13.75□□□□□ -0.21
CLK4-215ENST00000611733 SREBF1P36956 1147 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 ALDH5A1P51649 535 aaPredicted RBP13.75□□□□□ -0.21
CLK4-215ENST00000611733 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
CLK4-215ENST00000611733 ARHGAP4P98171 946 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 PRKCZQ05513 592 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 MYSM1Q5VVJ2 828 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 NSUN6Q8TEA1 469 aaKnown RBP13.75□□□□□ -0.21
CLK4-215ENST00000611733 NUDT12Q9BQG2 462 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 ZSCAN16Q9H4T2 348 aaPredicted RBP13.75□□□□□ -0.21
CLK4-215ENST00000611733 PCDHB6Q9Y5E3 794 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 ZNFX1Q9P2E3 1918 aaKnown RBP13.75□□□□□ -0.21
CLK4-215ENST00000611733 PLXNB2O15031 1838 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 TDP2O95551 362 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 NR3C2P08235 984 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 PDIA4P13667 645 aaKnown RBP13.75□□□□□ -0.21
CLK4-215ENST00000611733 FLT3LGP49771 235 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 KIF22Q14807 665 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 ZNF174Q15697 407 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 LETM2Q2VYF4 491 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 BRAPQ7Z569 592 aa13.75□□□□□ -0.21
CLK4-215ENST00000611733 FRMPD4Q14CM0 1322 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 FAM86B1E9PN63 330 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 FAM86B2P0C5J1 330 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 CEBPZQ03701 1054 aaKnown RBP13.74□□□□□ -0.21
CLK4-215ENST00000611733 DNM1Q05193 864 aaKnown RBP13.74□□□□□ -0.21
CLK4-215ENST00000611733 DNERQ8NFT8 737 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 MAML3Q96JK9 1138 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 MAF1Q9H063 256 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 CLIC4Q9Y696 253 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 MRVI1Q9Y6F6 885 aa13.74□□□□□ -0.21
CLK4-215ENST00000611733 HSPA1AP0DMV8 641 aaKnown RBP13.73□□□□□ -0.21
CLK4-215ENST00000611733 HSPA1BP0DMV9 641 aaKnown RBP13.73□□□□□ -0.21
CLK4-215ENST00000611733 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 NEK8Q86SG6 692 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 VSIG10LQ86VR7 867 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 TNPO1Q92973 898 aaKnown RBP13.73□□□□□ -0.21
CLK4-215ENST00000611733 RBBP6Q7Z6E9 1792 aaKnown RBP13.73□□□□□ -0.21
CLK4-215ENST00000611733 CCNT1O60563 726 aaKnown RBP13.73□□□□□ -0.21
CLK4-215ENST00000611733 RGS20O76081 388 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 HSPA8P11142 646 aaKnown RBP13.73□□□□□ -0.21
CLK4-215ENST00000611733 ITGB5P18084 799 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 TEX2Q8IWB9 1127 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 GJA10Q969M2 543 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 ERO1AQ96HE7 468 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 USP28Q96RU2 1077 aa13.73□□□□□ -0.21
CLK4-215ENST00000611733 MGAMO43451 1857 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 SLC37A4O43826 429 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 CYP3A4P08684 503 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 HOXC6P09630 235 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 EDNRBP24530 442 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 MCM7P33993 719 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 RGS2P41220 211 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 USP11P51784 963 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 TTC38Q5R3I4 469 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 PCNX4Q63HM2 1172 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 MCTP2Q6DN12 878 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 WDR11Q9BZH6 1224 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 ADD3Q9UEY8 706 aaKnown RBP13.72□□□□□ -0.21
CLK4-215ENST00000611733 SRRDQ9UH36 339 aa13.72□□□□□ -0.21
CLK4-215ENST00000611733 SNAI1O95863 264 aaPredicted RBP13.72□□□□□ -0.21
CLK4-215ENST00000611733 LBX1P52954 281 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms