RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 GDF3Q9NR23 364 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 BARHL2Q9NY43 387 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 GGA2Q9UJY4 613 aa24.8■■□□□ 1.56
SHANK2-220ENST00000608988 PVALEFA0A1B0GWK0 134 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 ADAMTS2O95450 1211 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 VEGFAP15692 232 aaPredicted RBP24.79■■□□□ 1.56
SHANK2-220ENST00000608988 STK4Q13043 487 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 EZH2Q15910 746 aaKnown RBP24.79■■□□□ 1.56
SHANK2-220ENST00000608988 YTHDF3Q7Z739 585 aaKnown RBP24.79■■□□□ 1.56
SHANK2-220ENST00000608988 ANKRD65E5RJM6 399 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 RBAK-RBAKDNI3L0D1 243 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 NMT2O60551 498 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 GYG1P46976 350 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 TTMPQ5BVD1 217 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 FAM47AQ5JRC9 791 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 KRT26Q7Z3Y9 468 aa24.79■■□□□ 1.56
SHANK2-220ENST00000608988 EIF1ADQ8N9N8 165 aaKnown RBP24.79■■□□□ 1.56
SHANK2-220ENST00000608988 SYN2Q92777 582 aaPredicted RBP24.79■■□□□ 1.56
SHANK2-220ENST00000608988 NSUN4Q96CB9 384 aaKnown RBP24.79■■□□□ 1.56
SHANK2-220ENST00000608988 LRRC63Q05C16 580 aa24.78■■□□□ 1.56
SHANK2-220ENST00000608988 INF2Q27J81 1249 aa24.78■■□□□ 1.56
SHANK2-220ENST00000608988 NFRKBQ6P4R8 1299 aa24.78■■□□□ 1.56
SHANK2-220ENST00000608988 CNPY4Q8N129 248 aa24.78■■□□□ 1.56
SHANK2-220ENST00000608988 TSEN2Q8NCE0 465 aaKnown RBP24.78■■□□□ 1.56
SHANK2-220ENST00000608988 ZNF384Q8TF68 577 aa24.78■■□□□ 1.56
SHANK2-220ENST00000608988 GPKOWQ92917 476 aaPredicted RBP eCLIP24.78■■□□□ 1.56
SHANK2-220ENST00000608988 STXBP3O00186 592 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 KIAA0754O94854 1291 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 ASTE1Q2TB18 679 aaPredicted RBP24.77■■□□□ 1.56
SHANK2-220ENST00000608988 IQCKQ8N0W5 287 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 PNMA1Q8ND90 353 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 SMCR8Q8TEV9 937 aaPredicted RBP24.77■■□□□ 1.56
SHANK2-220ENST00000608988 CCDC87Q9NVE4 849 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 STK17AQ9UEE5 414 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 PLEKP08567 350 aaPredicted RBP24.77■■□□□ 1.56
SHANK2-220ENST00000608988 LIG3P49916 1009 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 CFAP58Q5T655 872 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 PDXDC1Q6P996 788 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 PLCD3Q8N3E9 789 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 GUF1Q8N442 669 aaKnown RBP24.77■■□□□ 1.56
SHANK2-220ENST00000608988 WHAMMQ8TF30 809 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 LRRC15Q8TF66 581 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 CALML4Q96GE6 196 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 NCAPGQ9BPX3 1015 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 TLR10Q9BXR5 811 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 SEMA6BQ9H3T3 888 aa24.77■■□□□ 1.56
SHANK2-220ENST00000608988 BSDC1Q9NW68 430 aaPredicted RBP24.77■■□□□ 1.56
SHANK2-220ENST00000608988 NDUFAB1O14561 156 aa24.76■■□□□ 1.55
SHANK2-220ENST00000608988 CAMTA2O94983 1202 aa24.76■■□□□ 1.55
SHANK2-220ENST00000608988 CCDC91Q7Z6B0 441 aa24.76■■□□□ 1.55
SHANK2-220ENST00000608988 BAP1Q92560 729 aa24.76■■□□□ 1.55
SHANK2-220ENST00000608988 ARL8AQ96BM9 186 aa24.76■■□□□ 1.55
SHANK2-220ENST00000608988 ZIM3Q96PE6 472 aa24.76■■□□□ 1.55
SHANK2-220ENST00000608988 LRRC27Q9C0I9 530 aa24.76■■□□□ 1.55
SHANK2-220ENST00000608988 ZNF335Q9H4Z2 1342 aaPredicted RBP24.75■■□□□ 1.55
SHANK2-220ENST00000608988 FSBPO95073 299 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 TXNRD1Q16881 649 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 UNC13DQ70J99 1090 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 FBXO33Q7Z6M2 555 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 RASGRP4Q8TDF6 673 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 MAD2L2Q9UI95 211 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 KLHDC7AQ5VTJ3 777 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.75■■□□□ 1.55
SHANK2-220ENST00000608988 PRPF38AQ8NAV1 312 aaKnown RBP24.75■■□□□ 1.55
SHANK2-220ENST00000608988 KIAA0895Q8NCT3 520 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 FAM84BQ96KN1 310 aaPredicted RBP24.75■■□□□ 1.55
SHANK2-220ENST00000608988 ZMYND12Q9H0C1 365 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 EPN3Q9H201 632 aa24.75■■□□□ 1.55
SHANK2-220ENST00000608988 ROBO3Q96MS0 1386 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 LRRC53A6NM62 1247 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 CES2O00748 559 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 SLC7A5Q01650 507 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 MECOMQ03112 1051 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 PSMD2Q13200 908 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 NONOQ15233 471 aaKnown RBP eCLIP24.74■■□□□ 1.55
SHANK2-220ENST00000608988 INTS5Q6P9B9 1019 aaKnown RBP24.74■■□□□ 1.55
SHANK2-220ENST00000608988 SV2BQ7L1I2 683 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 PROM2Q8N271 834 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 DRC1Q96MC2 740 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 MYCBPQ99417 103 aaPredicted RBP24.74■■□□□ 1.55
SHANK2-220ENST00000608988 PLIN2Q99541 437 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 RIC8AQ9NPQ8 531 aa24.74■■□□□ 1.55
SHANK2-220ENST00000608988 RBM12Q9NTZ6 932 aaKnown RBP24.74■■□□□ 1.55
SHANK2-220ENST00000608988 HMGB1P1B2RPK0 211 aaPredicted RBP24.73■■□□□ 1.55
SHANK2-220ENST00000608988 FCER1AP12319 257 aa24.73■■□□□ 1.55
SHANK2-220ENST00000608988 SF3B3Q15393 1217 aaKnown RBP24.73■■□□□ 1.55
SHANK2-220ENST00000608988 RRAGAQ7L523 313 aa24.73■■□□□ 1.55
SHANK2-220ENST00000608988 KAT2BQ92831 832 aa24.73■■□□□ 1.55
SHANK2-220ENST00000608988 MMRN2Q9H8L6 949 aa24.73■■□□□ 1.55
SHANK2-220ENST00000608988 MEFVO15553 781 aaPredicted RBP24.72■■□□□ 1.55
SHANK2-220ENST00000608988 HNRNPH1P31943 449 aaKnown RBP24.72■■□□□ 1.55
SHANK2-220ENST00000608988 MATR3P43243 847 aaKnown RBP eCLIP24.72■■□□□ 1.559e-7■■■■□ 23.2
SHANK2-220ENST00000608988 C3orf20Q8ND61 904 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 TSG101Q99816 390 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 FAM207AQ9NSI2 230 aaPredicted RBP24.72■■□□□ 1.55
SHANK2-220ENST00000608988 GNA11P29992 359 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 SETQ01105 290 aaPredicted RBP24.72■■□□□ 1.55
SHANK2-220ENST00000608988 TFAP4Q01664 338 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 PLCB4Q15147 1175 aa24.72■■□□□ 1.55
SHANK2-220ENST00000608988 LRIG3Q6UXM1 1119 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms