RNA–Protein interactions for RNA: ENST00000598758.5

TGFB1-203, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-203ENST00000598758 FAM160B2Q86V87 743 aa11.1□□□□□ -0.63
TGFB1-203ENST00000598758 DHX38Q92620 1227 aaKnown RBP11.1□□□□□ -0.63
TGFB1-203ENST00000598758 FBXL18Q96ME1 805 aa11.1□□□□□ -0.63
TGFB1-203ENST00000598758 UIMC1Q96RL1 719 aa11.1□□□□□ -0.63
TGFB1-203ENST00000598758 LMCD1Q9NZU5 365 aa11.1□□□□□ -0.63
TGFB1-203ENST00000598758 KMT2EQ8IZD2 1858 aa11.1□□□□□ -0.63
TGFB1-203ENST00000598758 VPS13AQ96RL7 3174 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 LINC01553A4QN01 128 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 NFIBO00712 420 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 GPAA1O43292 621 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 PLA2G6O60733 806 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 SSTR3P32745 418 aaPredicted RBP11.09□□□□□ -0.63
TGFB1-203ENST00000598758 KCNJ6P48051 423 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 IKQ13123 557 aaPredicted RBP11.09□□□□□ -0.63
TGFB1-203ENST00000598758 NFRKBQ6P4R8 1299 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 SLC30A10Q6XR72 485 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 ZNF444Q8N0Y2 327 aaPredicted RBP11.09□□□□□ -0.63
TGFB1-203ENST00000598758 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 CHURC1Q8WUH1 139 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 SNX27Q96L92 541 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 CCPG1Q9ULG6 757 aa11.09□□□□□ -0.63
TGFB1-203ENST00000598758 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 A6NJR5 290 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 SMARCA5O60264 1052 aaPredicted RBP11.08□□□□□ -0.64
TGFB1-203ENST00000598758 NMT2O60551 498 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 NBNO60934 754 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 RAB11FIP3O75154 756 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 ARIH2O95376 493 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 GJB5O95377 273 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 TSPY3P0CV98 308 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 TSPY8P0CW00 308 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 SLC1A4P43007 532 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 TDO2P48775 406 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 TFAP4Q01664 338 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 BFSP2Q13515 415 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 PTCRAQ6ISU1 281 aaPredicted RBP11.08□□□□□ -0.64
TGFB1-203ENST00000598758 GDF6Q6KF10 455 aaPredicted RBP11.08□□□□□ -0.64
TGFB1-203ENST00000598758 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 APPBP2Q92624 585 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
TGFB1-203ENST00000598758 PHOX2BQ99453 314 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 C17orf80Q9BSJ5 609 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 RANBP17Q9H2T7 1088 aaKnown RBP11.08□□□□□ -0.64
TGFB1-203ENST00000598758 IL17RBQ9NRM6 502 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 DMDP11532 3685 aa11.08□□□□□ -0.64
TGFB1-203ENST00000598758 ZFHX2Q9C0A1 2572 aaPredicted RBP11.08□□□□□ -0.64
TGFB1-203ENST00000598758 H3BQ06 376 aaPredicted RBP11.07□□□□□ -0.64
TGFB1-203ENST00000598758 CXCL10P02778 98 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 ICAM1P05362 532 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 PTPN11Q06124 597 aaPredicted RBP11.07□□□□□ -0.64
TGFB1-203ENST00000598758 MBTPS1Q14703 1052 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 PPP2R5BQ15173 497 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 PTGISQ16647 500 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 TSHZ3Q63HK5 1081 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 TTBK2Q6IQ55 1244 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 RCSD1Q6JBY9 416 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 LRRC8DQ7L1W4 858 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 IFNL3Q8IZI9 196 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 KBTBD3Q8NAB2 608 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 NEK9Q8TD19 979 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 AFAP1L1Q8TED9 768 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 WNT8BQ93098 351 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 ZBED2Q9BTP6 218 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 INCENPQ9NQS7 918 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 GPHNQ9NQX3 736 aaPredicted RBP11.07□□□□□ -0.64
TGFB1-203ENST00000598758 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 COL4A6Q14031 1691 aa11.07□□□□□ -0.64
TGFB1-203ENST00000598758 POTEB3A0JP26 581 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
TGFB1-203ENST00000598758 DCXO43602 365 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 EDNRBP24530 442 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 SLC16A2P36021 539 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 CHMP4BP1P59074 171 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 ZP2Q05996 745 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 RBL2Q08999 1139 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 LRRFIP1Q32MZ4 808 aaKnown RBP11.06□□□□□ -0.64
TGFB1-203ENST00000598758 CNKSR3Q6P9H4 555 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 POTEBQ6S5H4 581 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 CAGE1Q8TC20 777 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 KAT2BQ92831 832 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 SEC62Q99442 399 aaKnown RBP11.06□□□□□ -0.64
TGFB1-203ENST00000598758 RAD9AQ99638 391 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 ADD3Q9UEY8 706 aaKnown RBP11.06□□□□□ -0.64
TGFB1-203ENST00000598758 NOD1Q9Y239 953 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.06□□□□□ -0.644e-7■■■■■ 28.7
TGFB1-203ENST00000598758 KIAA1671Q9BY89 1806 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 DOCK5Q9H7D0 1870 aa11.06□□□□□ -0.64
TGFB1-203ENST00000598758 PTPDC1A2A3K4 754 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 FOXP2O15409 715 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 HMMRO75330 724 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 CKBP12277 381 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 ALADP13716 330 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 SELPP16109 830 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 CALML3P27482 149 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 PPARAQ07869 468 aa11.05□□□□□ -0.64
TGFB1-203ENST00000598758 TRIM71Q2Q1W2 868 aaKnown RBP11.05□□□□□ -0.64
TGFB1-203ENST00000598758 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms