RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 THEGQ9P2T0 379 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 PTPRSQ13332 1948 aa12.39□□□□□ -0.43
CHMP2A-202ENST00000596708 WDR19Q8NEZ3 1342 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 ZNF213O14771 459 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 KPNA6O60684 536 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 PFKMP08237 780 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 ACTN1P12814 892 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 MYOGP15173 224 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 ATP2A2P16615 1042 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 TTLL4Q14679 1199 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 GPATCH4Q5T3I0 446 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 B4GALNT3Q6L9W6 998 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 TBC1D10CQ8IV04 446 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 MICALL1Q8N3F8 863 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 RETREG2Q8NC44 543 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 ATXN2LQ8WWM7 1075 aaKnown RBP12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 CPVLQ9H3G5 476 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 NOD1Q9Y239 953 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 PCDHA11Q9Y5I1 949 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 VCANP13611 3396 aa12.38□□□□□ -0.43
CHMP2A-202ENST00000596708 NCOR1O75376 2440 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 SNHG28P0DPA3 235 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 SDSP20132 328 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 CCDC178Q5BJE1 867 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 TMEM67Q5HYA8 995 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 IQCA1Q86XH1 822 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 FTOQ9C0B1 505 aaKnown RBP eCLIP12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 TSPYL2Q9H2G4 693 aaPredicted RBP12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 NEDD4P46934 1319 aa12.37□□□□□ -0.43
CHMP2A-202ENST00000596708 A6NJR5 290 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 DHX16O60231 1041 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 KDM4AO75164 1064 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 EDNRBP24530 442 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 RFC2P35250 354 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 MRPS5P82675 430 aaKnown RBP12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 PTPN11Q06124 597 aaPredicted RBP12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 BFSP2Q13515 415 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 CDC37Q16543 378 aaPredicted RBP12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 NFRKBQ6P4R8 1299 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 SEPT14Q6ZU15 432 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 PNMA1Q8ND90 353 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 RGS22Q8NE09 1264 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 VWCEQ96DN2 955 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 ASB2Q96Q27 587 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 TAAR1Q96RJ0 339 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 RWDD1Q9H446 243 aaPredicted RBP12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 VAT1LQ9HCJ6 419 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 ABCB11O95342 1321 aa12.36□□□□□ -0.43
CHMP2A-202ENST00000596708 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 ARIH2O95376 493 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 IQCF3P0C7M6 154 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 LY6KQ17RY6 165 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 CWC27Q6UX04 472 aaKnown RBP12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 CHST3Q7LGC8 479 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 ADGRF4Q8IZF3 695 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 CERS4Q9HA82 394 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 DIAPH3Q9NSV4 1193 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 DOCK5Q9H7D0 1870 aa12.35□□□□□ -0.43
CHMP2A-202ENST00000596708 TTC28Q96AY4 2481 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 B4E1Z4 1266 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 RFXAPO00287 272 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 GH1P01241 217 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 CA3P07451 260 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 CASTP20810 708 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 STXBP2Q15833 593 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 PTGISQ16647 500 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 ARHGEF16Q5VV41 709 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 MCF2L2Q86YR7 1114 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 PLEKHM2Q8IWE5 1019 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 SYTL5Q8TDW5 730 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 NSUN6Q8TEA1 469 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 AFG1LQ8WV93 481 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 ZSCAN10Q96SZ4 725 aaPredicted RBP12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 SLC9A7Q96T83 725 aa12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 MRPL11Q9Y3B7 192 aaKnown RBP12.34□□□□□ -0.43
CHMP2A-202ENST00000596708 GTPBP6O43824 516 aaPredicted RBP12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 MMP3P08254 477 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 PARP1P09874 1014 aaKnown RBP12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 NT5C2P49902 561 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 QRICH1Q2TAL8 776 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 ASPRV1Q53RT3 343 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 CCDC62Q6P9F0 684 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 CHD1LQ86WJ1 897 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 FBXO11Q86XK2 927 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 SMC5Q8IY18 1101 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 PHOSPHO2Q8TCD6 241 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 ADAMTS19Q8TE59 1207 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 IWS1Q96ST2 819 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 UHRF1Q96T88 793 aaPredicted RBP12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 RMDN3Q96TC7 470 aa12.33□□□□□ -0.44
CHMP2A-202ENST00000596708 MAF1Q9H063 256 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms