RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 YBX2Q9Y2T7 364 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-203ENST00000594298 RAD50Q92878 1312 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 A6NJR5 290 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 B4DLN1 442 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 MYL3P08590 195 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 MRPL12P52815 198 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 ADGRE1Q14246 886 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 NFRKBQ6P4R8 1299 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 SCLYQ96I15 445 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 SLC4A7Q9Y6M7 1214 aa20.53■□□□□ 0.88
SHKBP1-203ENST00000594298 CYP2C9P11712 490 aa20.52■□□□□ 0.88
SHKBP1-203ENST00000594298 CHMLP26374 656 aa20.52■□□□□ 0.88
SHKBP1-203ENST00000594298 ATXN2LQ8WWM7 1075 aaKnown RBP20.52■□□□□ 0.88
SHKBP1-203ENST00000594298 DSCC1Q9BVC3 393 aa20.52■□□□□ 0.88
SHKBP1-203ENST00000594298 CTNNA3Q9UI47 895 aa20.52■□□□□ 0.88
SHKBP1-203ENST00000594298 PCDHA11Q9Y5I1 949 aa20.52■□□□□ 0.88
SHKBP1-203ENST00000594298 NEDD4P46934 1319 aa20.52■□□□□ 0.87
SHKBP1-203ENST00000594298 ZNF213O14771 459 aa20.51■□□□□ 0.87
SHKBP1-203ENST00000594298 PTPN11Q06124 597 aaPredicted RBP20.51■□□□□ 0.87
SHKBP1-203ENST00000594298 NBPF20Q3BBV1 942 aa20.51■□□□□ 0.87
SHKBP1-203ENST00000594298 CCDC178Q5BJE1 867 aa20.51■□□□□ 0.87
SHKBP1-203ENST00000594298 PRDM6Q9NQX0 595 aa20.51■□□□□ 0.87
SHKBP1-203ENST00000594298 PITPNM1O00562 1244 aa20.5■□□□□ 0.87
SHKBP1-203ENST00000594298 RFC2P35250 354 aa20.5■□□□□ 0.87
SHKBP1-203ENST00000594298 BMP2KLQ5H9B9 411 aa20.5■□□□□ 0.87
SHKBP1-203ENST00000594298 ANKS1AQ92625 1134 aa20.5■□□□□ 0.87
SHKBP1-203ENST00000594298 GOLGA8HP0CJ92 632 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 TXNP10599 105 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 ATP2A2P16615 1042 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 RABGGTBP53611 331 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 TTLL4Q14679 1199 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 IQCA1Q86XH1 822 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 PNMA1Q8ND90 353 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 PPM1EQ8WY54 764 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 COPS5Q92905 334 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 ZKSCAN3Q9BRR0 538 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 UBA5Q9GZZ9 404 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 THEGQ9P2T0 379 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 ABCB11O95342 1321 aa20.49■□□□□ 0.87
SHKBP1-203ENST00000594298 ZBBXA8MT70 800 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 ARIH2O95376 493 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 IGFBP4P22692 258 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 CDC37Q16543 378 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 USH1GQ495M9 461 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 FAM47CQ5HY64 1035 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 PPP2R2DQ66LE6 453 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 CCDC62Q6P9F0 684 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 ASB2Q96Q27 587 aa20.48■□□□□ 0.87
SHKBP1-203ENST00000594298 IQCF3P0C7M6 154 aa20.47■□□□□ 0.87
SHKBP1-203ENST00000594298 ACTN1P12814 892 aa20.47■□□□□ 0.87
SHKBP1-203ENST00000594298 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
SHKBP1-203ENST00000594298 ASPRV1Q53RT3 343 aa20.47■□□□□ 0.87
SHKBP1-203ENST00000594298 DEFB128Q7Z7B8 93 aa20.47■□□□□ 0.87
SHKBP1-203ENST00000594298 CPVLQ9H3G5 476 aa20.47■□□□□ 0.87
SHKBP1-203ENST00000594298 KAT14Q9H8E8 782 aa20.47■□□□□ 0.87
SHKBP1-203ENST00000594298 SCN10AQ9Y5Y9 1956 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 CHD9Q3L8U1 2897 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 TNFRSF10AO00220 468 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 KDM4AO75164 1064 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 MYOGP15173 224 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 BFSP2Q13515 415 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 MCF2L2Q86YR7 1114 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 ADGRF4Q8IZF3 695 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 RETREG2Q8NC44 543 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 PHOSPHO2Q8TCD6 241 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 SYTL5Q8TDW5 730 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 NSUN6Q8TEA1 469 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 IWS1Q96ST2 819 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 ZSCAN10Q96SZ4 725 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 SLC9A7Q96T83 725 aa20.46■□□□□ 0.87
SHKBP1-203ENST00000594298 SGSM2O43147 1006 aa20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 MRPS5P82675 430 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 TMEM67Q5HYA8 995 aa20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 CASC1Q6TDU7 716 aa20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 SESTD1Q86VW0 696 aa20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 ENAHQ8N8S7 591 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 TBC1D5Q92609 795 aa20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 TAAR1Q96RJ0 339 aa20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 ZSWIM5Q9P217 1185 aa20.45■□□□□ 0.86
SHKBP1-203ENST00000594298 B4E1Z4 1266 aa20.44■□□□□ 0.86
SHKBP1-203ENST00000594298 GH1P01241 217 aa20.44■□□□□ 0.86
SHKBP1-203ENST00000594298 CCDC85BQ15834 202 aaPredicted RBP20.44■□□□□ 0.86
SHKBP1-203ENST00000594298 AFG1LQ8WV93 481 aa20.44■□□□□ 0.86
SHKBP1-203ENST00000594298 COL20A1Q9P218 1284 aa20.44■□□□□ 0.86
SHKBP1-203ENST00000594298 MMP3P08254 477 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 POU3F3P20264 500 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 ARHGAP1Q07960 439 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 STXBP2Q15833 593 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 LY6KQ17RY6 165 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 QRICH1Q2TAL8 776 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 PPP1R13LQ8WUF5 828 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 CTAGE1Q96RT6 745 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 RMDN3Q96TC7 470 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 NOD1Q9Y239 953 aa20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 MRPL11Q9Y3B7 192 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 U3KPZ7 1027 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-203ENST00000594298 BAIAP3O94812 1187 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 CA3P07451 260 aa20.42■□□□□ 0.86
SHKBP1-203ENST00000594298 PARP1P09874 1014 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms