RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 CUL4AQ13619 759 aa21.96■■□□□ 1.11
DDX39A-214ENST00000590556 ARMCX2Q7L311 632 aa21.96■■□□□ 1.11
DDX39A-214ENST00000590556 FAM184AQ8NB25 1140 aa21.96■■□□□ 1.11
DDX39A-214ENST00000590556 BICD2Q8TD16 824 aa21.96■■□□□ 1.11
DDX39A-214ENST00000590556 ARMC5Q96C12 935 aa21.96■■□□□ 1.11
DDX39A-214ENST00000590556 PXMP2Q9NR77 195 aa21.96■■□□□ 1.11
DDX39A-214ENST00000590556 MCM3APO60318 1980 aa21.96■■□□□ 1.11
DDX39A-214ENST00000590556 SPDYE3A6NKU9 549 aa21.95■■□□□ 1.1
DDX39A-214ENST00000590556 PRKAR2AP13861 404 aaKnown RBP21.95■■□□□ 1.1
DDX39A-214ENST00000590556 EIF2AK2P19525 551 aaKnown RBP21.95■■□□□ 1.1
DDX39A-214ENST00000590556 CACNB2Q08289 660 aaPredicted RBP21.95■■□□□ 1.1
DDX39A-214ENST00000590556 IWS1Q96ST2 819 aa21.95■■□□□ 1.1
DDX39A-214ENST00000590556 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.95■■□□□ 1.1
DDX39A-214ENST00000590556 KCNJ14Q9UNX9 436 aa21.95■■□□□ 1.1
DDX39A-214ENST00000590556 CNPY2Q9Y2B0 182 aa21.95■■□□□ 1.1
DDX39A-214ENST00000590556 SNAI1O95863 264 aaPredicted RBP21.94■■□□□ 1.1
DDX39A-214ENST00000590556 FOSP01100 380 aaPredicted RBP21.94■■□□□ 1.1
DDX39A-214ENST00000590556 FOSBP53539 338 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 PDE4DQ08499 809 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 TRIM29Q14134 588 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 PRAMEF19Q5SWL8 479 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 GALNT17Q6IS24 598 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 REXO1Q8N1G1 1221 aaKnown RBP21.94■■□□□ 1.1
DDX39A-214ENST00000590556 MORC4Q8TE76 937 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 GJB4Q9NTQ9 266 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 PCDHA4Q9UN74 947 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 SMC3Q9UQE7 1217 aa21.94■■□□□ 1.1
DDX39A-214ENST00000590556 DDX49Q9Y6V7 483 aaKnown RBP21.94■■□□□ 1.1
DDX39A-214ENST00000590556 MYCP01106 439 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-214ENST00000590556 EDNRBP24530 442 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 CLK2P49760 499 aaKnown RBP21.93■■□□□ 1.1
DDX39A-214ENST00000590556 MAP3K21Q5TCX8 1036 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 JAKMIP3Q5VZ66 844 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 MCTP2Q6DN12 878 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 ZNF333Q96JL9 665 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 PHF20Q9BVI0 1012 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 EHMT1Q9H9B1 1298 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 TMEM260Q9NX78 707 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 NRBP1Q9UHY1 535 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 PCDHA6Q9UN73 950 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 KIF3AQ9Y496 699 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 PCDHA8Q9Y5H6 950 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 HTTP42858 3142 aa21.93■■□□□ 1.1
DDX39A-214ENST00000590556 ADAMTS3O15072 1205 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 NR3C2P08235 984 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 GJB2P29033 226 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 AP3B2Q13367 1082 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 PGM5Q15124 567 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 TNS4Q8IZW8 715 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 BLIDQ8IZY5 108 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 DAGLBQ8NCG7 672 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 C8orf76Q96K31 380 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 PDCD2LQ9BRP1 358 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 ABHD16BQ9H3Z7 469 aa21.92■■□□□ 1.1
DDX39A-214ENST00000590556 HMX1Q9NP08 348 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-214ENST00000590556 FRMPD4Q14CM0 1322 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 RPTORQ8N122 1335 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 MYCLP12524 364 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-214ENST00000590556 CYBAP13498 195 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 ACVR2BQ13705 512 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 MTFR1Q15390 333 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 STXBP2Q15833 593 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 KRT40Q6A162 431 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 EEPD1Q7L9B9 569 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 TRPV1Q8NER1 839 aa21.91■■□□□ 1.1
DDX39A-214ENST00000590556 ZHX1Q9UKY1 873 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-214ENST00000590556 CCL5P13501 91 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 CNGA1P29973 690 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 CCND2P30279 289 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 CCND3P30281 292 aaPredicted RBP21.9■■□□□ 1.1
DDX39A-214ENST00000590556 NPY5RQ15761 445 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 VSIG10LQ86VR7 867 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 IL31RAQ8NI17 732 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 RASGRP4Q8TDF6 673 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 INTS4Q96HW7 963 aaKnown RBP21.9■■□□□ 1.1
DDX39A-214ENST00000590556 PGBD1Q96JS3 809 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 ANO3Q9BYT9 981 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 UNC93B1Q9H1C4 597 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 VTA1Q9NP79 307 aa21.9■■□□□ 1.1
DDX39A-214ENST00000590556 ZNF865P0CJ78 1059 aaPredicted RBP21.89■■□□□ 1.09
DDX39A-214ENST00000590556 GUCY1B3Q02153 619 aa21.89■■□□□ 1.09
DDX39A-214ENST00000590556 XRRA1Q6P2D8 792 aa21.89■■□□□ 1.09
DDX39A-214ENST00000590556 FBXO16Q8IX29 292 aaPredicted RBP21.89■■□□□ 1.09
DDX39A-214ENST00000590556 ABHD8Q96I13 439 aa21.89■■□□□ 1.09
DDX39A-214ENST00000590556 KATNBL1Q9H079 304 aa21.89■■□□□ 1.09
DDX39A-214ENST00000590556 RNF208Q9H0X6 261 aa21.89■■□□□ 1.09
DDX39A-214ENST00000590556 BRMS1Q9HCU9 246 aa21.89■■□□□ 1.09
DDX39A-214ENST00000590556 EIF3JO75822 258 aaKnown RBP21.88■■□□□ 1.09
DDX39A-214ENST00000590556 MMP1P03956 469 aa21.88■■□□□ 1.09
DDX39A-214ENST00000590556 KRT2P35908 639 aa21.88■■□□□ 1.09
DDX39A-214ENST00000590556 SAFBQ15424 915 aaKnown RBP eCLIP21.88■■□□□ 1.09
DDX39A-214ENST00000590556 PCNX4Q63HM2 1172 aa21.88■■□□□ 1.09
DDX39A-214ENST00000590556 FBXO18Q8NFZ0 1043 aa21.88■■□□□ 1.09
DDX39A-214ENST00000590556 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.88■■□□□ 1.099e-7■■■□□ 19
DDX39A-214ENST00000590556 FOXD4L1Q9NU39 408 aa21.88■■□□□ 1.09
DDX39A-214ENST00000590556 LRRC37A2A6NM11 1700 aa21.87■■□□□ 1.09
DDX39A-214ENST00000590556 M0R2N6 131 aa21.87■■□□□ 1.09
DDX39A-214ENST00000590556 HSP90AA1P07900 732 aaKnown RBP21.87■■□□□ 1.09
DDX39A-214ENST00000590556 OXER1Q8TDS5 423 aa21.87■■□□□ 1.09
DDX39A-214ENST00000590556 FAM184BQ9ULE4 1060 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms