RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 SOWAHBA6NEL2 793 aa22.44■■□□□ 1.18
CIRBP-220ENST00000588917 HMGCRP04035 888 aa22.44■■□□□ 1.18
CIRBP-220ENST00000588917 HOXA13P31271 388 aaPredicted RBP22.44■■□□□ 1.18
CIRBP-220ENST00000588917 BECN1Q14457 450 aa22.44■■□□□ 1.18
CIRBP-220ENST00000588917 ARHGEF16Q5VV41 709 aa22.44■■□□□ 1.18
CIRBP-220ENST00000588917 USP17L6PQ6QN14 398 aa22.44■■□□□ 1.18
CIRBP-220ENST00000588917 FCHSD1Q86WN1 690 aa22.44■■□□□ 1.18
CIRBP-220ENST00000588917 TAAR1Q96RJ0 339 aa22.44■■□□□ 1.18
CIRBP-220ENST00000588917 BIN2Q9UBW5 565 aaPredicted RBP22.44■■□□□ 1.18
CIRBP-220ENST00000588917 PLXNB2O15031 1838 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 SYNGAP1Q96PV0 1343 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 ALDH5A1P51649 535 aaPredicted RBP22.43■■□□□ 1.18
CIRBP-220ENST00000588917 UBXN2AP68543 259 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 AP3B2Q13367 1082 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 SH3TC2Q8TF17 1288 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 BRMS1Q9HCU9 246 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 NRBP1Q9UHY1 535 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 PCDHA4Q9UN74 947 aa22.43■■□□□ 1.18
CIRBP-220ENST00000588917 RBBP6Q7Z6E9 1792 aaKnown RBP22.43■■□□□ 1.18
CIRBP-220ENST00000588917 MYCP01106 439 aaPredicted RBP22.42■■□□□ 1.18
CIRBP-220ENST00000588917 HSP90AA1P07900 732 aaKnown RBP22.42■■□□□ 1.18
CIRBP-220ENST00000588917 REXO1Q8N1G1 1221 aaKnown RBP22.42■■□□□ 1.18
CIRBP-220ENST00000588917 AIFM3Q96NN9 605 aa22.42■■□□□ 1.18
CIRBP-220ENST00000588917 PHF20Q9BVI0 1012 aa22.42■■□□□ 1.18
CIRBP-220ENST00000588917 CNPY2Q9Y2B0 182 aa22.42■■□□□ 1.18
CIRBP-220ENST00000588917 ELNP15502 786 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 SAFBQ15424 915 aaKnown RBP eCLIP22.41■■□□□ 1.18
CIRBP-220ENST00000588917 STXBP2Q15833 593 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 CCL14Q16627 93 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 XRRA1Q6P2D8 792 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 DAGLBQ8NCG7 672 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 MORC4Q8TE76 937 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 TRIB2Q92519 343 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 C8orf76Q96K31 380 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 ABHD16BQ9H3Z7 469 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 PXMP2Q9NR77 195 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 FLRT1Q9NZU1 646 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 COL20A1Q9P218 1284 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 PCDHA6Q9UN73 950 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 PCDHA8Q9Y5H6 950 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 ZSWIM8A7E2V4 1837 aa22.41■■□□□ 1.18
CIRBP-220ENST00000588917 IGHA2P01877 340 aa22.4■■□□□ 1.18
CIRBP-220ENST00000588917 GJB2P29033 226 aa22.4■■□□□ 1.18
CIRBP-220ENST00000588917 CLK2P49760 499 aaKnown RBP22.4■■□□□ 1.18
CIRBP-220ENST00000588917 PDE4DQ08499 809 aa22.4■■□□□ 1.18
CIRBP-220ENST00000588917 HABP4Q5JVS0 413 aaKnown RBP22.4■■□□□ 1.18
CIRBP-220ENST00000588917 BLIDQ8IZY5 108 aa22.4■■□□□ 1.18
CIRBP-220ENST00000588917 FGD4Q96M96 766 aa22.4■■□□□ 1.18
CIRBP-220ENST00000588917 PURBQ96QR8 312 aaKnown RBP22.4■■□□□ 1.18
CIRBP-220ENST00000588917 PDCP20941 246 aa22.39■■□□□ 1.17
CIRBP-220ENST00000588917 UBE2SQ16763 222 aa22.39■■□□□ 1.17
CIRBP-220ENST00000588917 ARMCX2Q7L311 632 aa22.39■■□□□ 1.17
CIRBP-220ENST00000588917 FBXO18Q8NFZ0 1043 aa22.39■■□□□ 1.17
CIRBP-220ENST00000588917 PDCD2LQ9BRP1 358 aa22.39■■□□□ 1.17
CIRBP-220ENST00000588917 KCNJ14Q9UNX9 436 aa22.39■■□□□ 1.17
CIRBP-220ENST00000588917 SMCHD1A6NHR9 2005 aa22.39■■□□□ 1.17
CIRBP-220ENST00000588917 ZNFX1Q9P2E3 1918 aaKnown RBP22.39■■□□□ 1.17
CIRBP-220ENST00000588917 DTNBO60941 627 aa22.38■■□□□ 1.17
CIRBP-220ENST00000588917 EIF3JO75822 258 aaKnown RBP22.38■■□□□ 1.17
CIRBP-220ENST00000588917 STAM2O75886 525 aa22.38■■□□□ 1.17
CIRBP-220ENST00000588917 NR3C2P08235 984 aa22.38■■□□□ 1.17
CIRBP-220ENST00000588917 PDIA4P13667 645 aaKnown RBP22.38■■□□□ 1.17
CIRBP-220ENST00000588917 EIF2AK2P19525 551 aaKnown RBP22.38■■□□□ 1.17
CIRBP-220ENST00000588917 EDNRBP24530 442 aa22.38■■□□□ 1.17
CIRBP-220ENST00000588917 CYP2C19P33261 490 aa22.38■■□□□ 1.17
CIRBP-220ENST00000588917 KRT40Q6A162 431 aa22.38■■□□□ 1.17
CIRBP-220ENST00000588917 HMX1Q9NP08 348 aaPredicted RBP22.38■■□□□ 1.17
CIRBP-220ENST00000588917 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.38■■□□□ 1.17
CIRBP-220ENST00000588917 RPTORQ8N122 1335 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 DOCK3Q8IZD9 2030 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 SNAI1O95863 264 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-220ENST00000588917 MMP1P03956 469 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 INHAP05111 366 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 CCND2P30279 289 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 KRT2P35908 639 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 CACNB2Q08289 660 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-220ENST00000588917 PGM5Q15124 567 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 JAKMIP3Q5VZ66 844 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 VSIG10LQ86VR7 867 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 VTA1Q9NP79 307 aa22.37■■□□□ 1.17
CIRBP-220ENST00000588917 ASTN1O14525 1302 aa22.36■■□□□ 1.17
CIRBP-220ENST00000588917 PRKAR2AP13861 404 aaKnown RBP22.36■■□□□ 1.17
CIRBP-220ENST00000588917 ACVR2BQ13705 512 aa22.36■■□□□ 1.17
CIRBP-220ENST00000588917 MAP3K21Q5TCX8 1036 aa22.36■■□□□ 1.17
CIRBP-220ENST00000588917 PCNX4Q63HM2 1172 aa22.36■■□□□ 1.17
CIRBP-220ENST00000588917 LARP1BQ659C4 914 aaKnown RBP22.36■■□□□ 1.17
CIRBP-220ENST00000588917 SHISA4Q96DD7 197 aa22.36■■□□□ 1.17
CIRBP-220ENST00000588917 FRMPD4Q14CM0 1322 aa22.35■■□□□ 1.17
CIRBP-220ENST00000588917 H3BQV1 296 aa22.35■■□□□ 1.17
CIRBP-220ENST00000588917 MYCLP12524 364 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-220ENST00000588917 KRT25Q7Z3Z0 450 aa22.35■■□□□ 1.17
CIRBP-220ENST00000588917 ANO3Q9BYT9 981 aa22.35■■□□□ 1.17
CIRBP-220ENST00000588917 GJB4Q9NTQ9 266 aa22.35■■□□□ 1.17
CIRBP-220ENST00000588917 TMEM260Q9NX78 707 aa22.35■■□□□ 1.17
CIRBP-220ENST00000588917 CCDC194A0A1B0GVG4 234 aa22.34■■□□□ 1.17
CIRBP-220ENST00000588917 M0R2N6 131 aa22.34■■□□□ 1.17
CIRBP-220ENST00000588917 SREBF1P36956 1147 aa22.34■■□□□ 1.17
CIRBP-220ENST00000588917 MTFR1Q15390 333 aa22.34■■□□□ 1.17
CIRBP-220ENST00000588917 IQSEC1Q6DN90 963 aa22.34■■□□□ 1.17
CIRBP-220ENST00000588917 KCNV1Q6PIU1 500 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms