RNA–Protein interactions for RNA: ENST00000588852.1

SAFB-205, Transcript of scaffold attachment factor B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SAFB, Length 2,842 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-205ENST00000588852 GNPATO15228 680 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 CDK8P49336 464 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 VAV2P52735 878 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 GFPT1Q06210 699 aaPredicted RBP16.97■□□□□ 0.31
SAFB-205ENST00000588852 ENOX2Q16206 610 aaKnown RBP16.97■□□□□ 0.31
SAFB-205ENST00000588852 MS4A14Q96JA4 679 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 C7orf25Q9BPX7 421 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 NDST4Q9H3R1 872 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 NLRC4Q9NPP4 1024 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 KIF11P52732 1056 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 ECM1Q16610 540 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 DAGLBQ8NCG7 672 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 PNMA5Q96PV4 448 aa16.97■□□□□ 0.31
SAFB-205ENST00000588852 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 CASZ1Q86V15 1759 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 GNAQP50148 359 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 SPA17Q15506 151 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 DNAJC21Q5F1R6 531 aaKnown RBP16.96■□□□□ 0.31
SAFB-205ENST00000588852 ANKS1AQ92625 1134 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 PURBQ96QR8 312 aaKnown RBP16.96■□□□□ 0.31
SAFB-205ENST00000588852 FGFBP2Q9BYJ0 223 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 ANKRD2Q9GZV1 360 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 DEF6Q9H4E7 631 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 SIK3Q9Y2K2 1263 aa16.96■□□□□ 0.31
SAFB-205ENST00000588852 COL16A1Q07092 1604 aaPredicted RBP16.96■□□□□ 0.31
SAFB-205ENST00000588852 BICDL2A1A5D9 508 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 PRPHP41219 470 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 BTDP43251 543 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 TUBB4BP68371 445 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.3
SAFB-205ENST00000588852 PPARDQ03181 441 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 VWA3BQ502W6 1294 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 ZSCAN29Q8IWY8 852 aaPredicted RBP16.96■□□□□ 0.3
SAFB-205ENST00000588852 LAMB1P07942 1786 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 LAMB2P55268 1798 aa16.96■□□□□ 0.3
SAFB-205ENST00000588852 COL14A1Q05707 1796 aaKnown RBP16.96■□□□□ 0.3
SAFB-205ENST00000588852 AKR1B10O60218 316 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 RASSF7Q02833 373 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 CCDC170Q8IYT3 715 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
SAFB-205ENST00000588852 ERGIC2Q96RQ1 377 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 CRACR2AQ9BSW2 395 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 NUP58Q9BVL2 599 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 SNX12Q9UMY4 172 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 PLAGL2Q9UPG8 496 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 RNASE9P60153 205 aaKnown RBP16.95■□□□□ 0.3
SAFB-205ENST00000588852 CENPPQ6IPU0 288 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 SND1Q7KZF4 910 aaKnown RBP eCLIP16.95■□□□□ 0.3
SAFB-205ENST00000588852 DNAAF5Q86Y56 855 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 AFAP1L1Q8TED9 768 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 TANGO6Q9C0B7 1094 aa16.95■□□□□ 0.3
SAFB-205ENST00000588852 COL22A1Q8NFW1 1626 aaPredicted RBP16.94■□□□□ 0.3
SAFB-205ENST00000588852 UBE2SQ16763 222 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 SV2BQ7L1I2 683 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 SH2D4AQ9H788 454 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 C6orf50Q9HD87 102 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 MED4Q9NPJ6 270 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 CWC15Q9P013 229 aaKnown RBP16.94■□□□□ 0.3
SAFB-205ENST00000588852 ZSCAN5CA6NGD5 496 aaPredicted RBP16.94■□□□□ 0.3
SAFB-205ENST00000588852 MYL1P05976 194 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 ARID5AQ03989 594 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 SOGA3Q5TF21 947 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 KRT25Q7Z3Z0 450 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
SAFB-205ENST00000588852 SPATA4Q8NEY3 305 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 MTMR8Q96EF0 704 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 CALML4Q96GE6 196 aa16.94■□□□□ 0.3
SAFB-205ENST00000588852 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
SAFB-205ENST00000588852 FAM170AA1A519 330 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 LAD1O00515 517 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 SLC1A4P43007 532 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 CALCRLQ16602 461 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 SPTY2D1Q68D10 685 aaPredicted RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 CNNM4Q6P4Q7 775 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 NOC3LQ8WTT2 800 aaKnown RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 AK8Q96MA6 479 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 OSBPL9Q96SU4 736 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 GPCPD1Q9NPB8 672 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 PACSIN2Q9UNF0 486 aaPredicted RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 MYH1P12882 1939 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 ESYT3A0FGR9 886 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 BAG3O95817 575 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 SSBP05455 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
SAFB-205ENST00000588852 AARSP49588 968 aaKnown RBP eCLIP16.93■□□□□ 0.33e-7■□□□□ 10
SAFB-205ENST00000588852 NAP1L1P55209 391 aaKnown RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 CKAP4Q07065 602 aaKnown RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 PTPROQ16827 1216 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 MSL3Q8N5Y2 521 aaKnown RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 EHBP1Q8NDI1 1231 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 LARP4BQ92615 738 aaKnown RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 DDX12PQ92771 950 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 CCDC47Q96A33 483 aaKnown RBP16.93■□□□□ 0.3
SAFB-205ENST00000588852 NARFQ9UHQ1 456 aa16.93■□□□□ 0.3
SAFB-205ENST00000588852 AMOTL1Q8IY63 956 aa16.92■□□□□ 0.3
SAFB-205ENST00000588852 TEX11Q8IYF3 940 aa16.92■□□□□ 0.3
SAFB-205ENST00000588852 SMARCC1Q92922 1105 aaPredicted RBP16.92■□□□□ 0.3
SAFB-205ENST00000588852 TNNI2P48788 182 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms