RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 ZMYND12Q9H0C1 365 aa17.82■□□□□ 0.44
GHDC-209ENST00000588762 HMX1Q9NP08 348 aaPredicted RBP17.82■□□□□ 0.44
GHDC-209ENST00000588762 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.82■□□□□ 0.44
GHDC-209ENST00000588762 NRBP1Q9UHY1 535 aa17.82■□□□□ 0.44
GHDC-209ENST00000588762 CENPFP49454 3210 aa17.82■□□□□ 0.44
GHDC-209ENST00000588762 KIAA1217Q5T5P2 1943 aa17.82■□□□□ 0.44
GHDC-209ENST00000588762 LRRC37A2A6NM11 1700 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 ASTN1O14525 1302 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 RPTORQ8N122 1335 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 SPDYE3A6NKU9 549 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 JAK2O60674 1132 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 DTNBO60941 627 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 CCL5P13501 91 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 CNGA1P29973 690 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 HMGN5P82970 282 aaKnown RBP17.81■□□□□ 0.44
GHDC-209ENST00000588762 UBE2SQ16763 222 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 MAP3K21Q5TCX8 1036 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 ALG1Q9BT22 464 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 ABHD16BQ9H3Z7 469 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 EHMT1Q9H9B1 1298 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 PXMP2Q9NR77 195 aa17.81■□□□□ 0.44
GHDC-209ENST00000588762 SNAI1O95863 264 aaPredicted RBP17.8■□□□□ 0.44
GHDC-209ENST00000588762 FDPSP14324 419 aaKnown RBP17.8■□□□□ 0.44
GHDC-209ENST00000588762 EIF2AK2P19525 551 aaKnown RBP17.8■□□□□ 0.44
GHDC-209ENST00000588762 TRIM29Q14134 588 aa17.8■□□□□ 0.44
GHDC-209ENST00000588762 PRAMEF19Q5SWL8 479 aa17.8■□□□□ 0.44
GHDC-209ENST00000588762 MORC4Q8TE76 937 aa17.8■□□□□ 0.44
GHDC-209ENST00000588762 AIFM3Q96NN9 605 aa17.8■□□□□ 0.44
GHDC-209ENST00000588762 TMEM106CQ9BVX2 250 aa17.8■□□□□ 0.44
GHDC-209ENST00000588762 RNF208Q9H0X6 261 aa17.8■□□□□ 0.44
GHDC-209ENST00000588762 UNC93B1Q9H1C4 597 aa17.8■□□□□ 0.44
GHDC-209ENST00000588762 FOSP01100 380 aaPredicted RBP17.79■□□□□ 0.44
GHDC-209ENST00000588762 CYBAP13498 195 aa17.79■□□□□ 0.44
GHDC-209ENST00000588762 ACVR2BQ13705 512 aa17.79■□□□□ 0.44
GHDC-209ENST00000588762 MTFR1Q15390 333 aa17.79■□□□□ 0.44
GHDC-209ENST00000588762 GALNT17Q6IS24 598 aa17.79■□□□□ 0.44
GHDC-209ENST00000588762 REXO1Q8N1G1 1221 aaKnown RBP17.79■□□□□ 0.44
GHDC-209ENST00000588762 FAM184AQ8NB25 1140 aa17.79■□□□□ 0.44
GHDC-209ENST00000588762 SNX21Q969T3 373 aa17.79■□□□□ 0.44
GHDC-209ENST00000588762 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.79■□□□□ 0.44
GHDC-209ENST00000588762 ZHX1Q9UKY1 873 aaPredicted RBP17.79■□□□□ 0.44
GHDC-209ENST00000588762 KIF3AQ9Y496 699 aa17.79■□□□□ 0.44
GHDC-209ENST00000588762 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.79■□□□□ 0.44
GHDC-209ENST00000588762 K7ELQ4 463 aaPredicted RBP17.78■□□□□ 0.44
GHDC-209ENST00000588762 NR3C2P08235 984 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 EDNRBP24530 442 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 CCND2P30279 289 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 CCND3P30281 292 aaPredicted RBP17.78■□□□□ 0.44
GHDC-209ENST00000588762 AP3B2Q13367 1082 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 STXBP2Q15833 593 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 HSCBQ8IWL3 235 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 TRPV1Q8NER1 839 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 VTA1Q9NP79 307 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 PCDHA6Q9UN73 950 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 PCDHA8Q9Y5H6 950 aa17.78■□□□□ 0.44
GHDC-209ENST00000588762 DDX49Q9Y6V7 483 aaKnown RBP17.78■□□□□ 0.44
GHDC-209ENST00000588762 FRMPD3Q5JV73 1810 aa17.77■□□□□ 0.44
GHDC-209ENST00000588762 MYH7BA7E2Y1 1941 aa17.77■□□□□ 0.44
GHDC-209ENST00000588762 MYCLP12524 364 aaPredicted RBP17.77■□□□□ 0.44
GHDC-209ENST00000588762 PGM5Q15124 567 aa17.77■□□□□ 0.44
GHDC-209ENST00000588762 EEPD1Q7L9B9 569 aa17.77■□□□□ 0.44
GHDC-209ENST00000588762 PHF20Q9BVI0 1012 aa17.77■□□□□ 0.44
GHDC-209ENST00000588762 FAM184BQ9ULE4 1060 aa17.77■□□□□ 0.44
GHDC-209ENST00000588762 PCDHA4Q9UN74 947 aa17.77■□□□□ 0.44
GHDC-209ENST00000588762 FRMPD4Q14CM0 1322 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 CCDC85CA6NKD9 419 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 SEPT4O43236 478 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 MSCO60682 206 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 EIF3JO75822 258 aaKnown RBP17.76■□□□□ 0.43
GHDC-209ENST00000588762 ZNF865P0CJ78 1059 aaPredicted RBP17.76■□□□□ 0.43
GHDC-209ENST00000588762 CLK2P49760 499 aaKnown RBP17.76■□□□□ 0.43
GHDC-209ENST00000588762 JAKMIP3Q5VZ66 844 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 XRRA1Q6P2D8 792 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 FBXO16Q8IX29 292 aaPredicted RBP17.76■□□□□ 0.43
GHDC-209ENST00000588762 BLIDQ8IZY5 108 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 SHISA4Q96DD7 197 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 BRMS1Q9HCU9 246 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 PAK6Q9NQU5 681 aaPredicted RBP17.76■□□□□ 0.43
GHDC-209ENST00000588762 TMEM260Q9NX78 707 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 KCNJ14Q9UNX9 436 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 SMC3Q9UQE7 1217 aa17.76■□□□□ 0.43
GHDC-209ENST00000588762 KIAA0100Q14667 2235 aaKnown RBP17.76■□□□□ 0.43
GHDC-209ENST00000588762 GJB1P08034 283 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 AKR1A1P14550 325 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 FOSBP53539 338 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 CUL4AQ13619 759 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 CCDC144BQ3MJ40 725 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 PCNX4Q63HM2 1172 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 VSIG10LQ86VR7 867 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 DAGLBQ8NCG7 672 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 IL31RAQ8NI17 732 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 C8orf76Q96K31 380 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 DEFB118Q96PH6 123 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 ANO3Q9BYT9 981 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 KATNBL1Q9H079 304 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 GJB4Q9NTQ9 266 aa17.75■□□□□ 0.43
GHDC-209ENST00000588762 DDX20Q9UHI6 824 aaKnown RBP17.75■□□□□ 0.43
GHDC-209ENST00000588762 STAM2O75886 525 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms