RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 TXNP10599 105 aaKnown RBP16.04■□□□□ 0.16
HDAC5-208ENST00000588419 MRPL12P52815 198 aaKnown RBP16.04■□□□□ 0.16
HDAC5-208ENST00000588419 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 RPUSD2Q8IZ73 545 aaKnown RBP16.04■□□□□ 0.16
HDAC5-208ENST00000588419 MICALL1Q8N3F8 863 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 SCFD2Q8WU76 684 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 SEZ6LQ9BYH1 1024 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 SLC28A3Q9HAS3 691 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 VAT1LQ9HCJ6 419 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 YBX2Q9Y2T7 364 aaKnown RBP16.04■□□□□ 0.16
HDAC5-208ENST00000588419 SLC4A7Q9Y6M7 1214 aa16.04■□□□□ 0.16
HDAC5-208ENST00000588419 TET1Q8NFU7 2136 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 LOC102724159A0A0B4J2E5 919 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 RBM47A0AV96 593 aaKnown RBP16.03■□□□□ 0.16
HDAC5-208ENST00000588419 NKRFO15226 690 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC5-208ENST00000588419 SUPT20HL2P0C7V6 817 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 MYOGP15173 224 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 TTLL4Q14679 1199 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 PWP2Q15269 919 aaKnown RBP16.03■□□□□ 0.16
HDAC5-208ENST00000588419 IMMTQ16891 758 aaKnown RBP16.03■□□□□ 0.16
HDAC5-208ENST00000588419 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 PPP2R2DQ66LE6 453 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 SEPT14Q6ZU15 432 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 CHST3Q7LGC8 479 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 DNERQ8NFT8 737 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 EXOC6Q8TAG9 804 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 TCF20Q9UGU0 1960 aaKnown RBP16.03■□□□□ 0.16
HDAC5-208ENST00000588419 DOCK5Q9H7D0 1870 aa16.03■□□□□ 0.16
HDAC5-208ENST00000588419 COL4A4P53420 1690 aaPredicted RBP16.02■□□□□ 0.16
HDAC5-208ENST00000588419 ABCB11O95342 1321 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 BAZ2BQ9UIF8 2168 aaKnown RBP16.02■□□□□ 0.16
HDAC5-208ENST00000588419 ARIH2O95376 493 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 NUCB1Q02818 461 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 DGKHQ86XP1 1220 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 TICAM2Q86XR7 235 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 ADGRF4Q8IZF3 695 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 TBC1D5Q92609 795 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 ZSCAN10Q96SZ4 725 aaPredicted RBP16.02■□□□□ 0.16
HDAC5-208ENST00000588419 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.16
HDAC5-208ENST00000588419 HIP1O00291 1037 aa16.01■□□□□ 0.15
HDAC5-208ENST00000588419 PARP1P09874 1014 aaKnown RBP16.01■□□□□ 0.15
HDAC5-208ENST00000588419 ATP2A2P16615 1042 aaKnown RBP16.01■□□□□ 0.15
HDAC5-208ENST00000588419 EDNRBP24530 442 aa16.01■□□□□ 0.15
HDAC5-208ENST00000588419 QRICH1Q2TAL8 776 aa16.01■□□□□ 0.15
HDAC5-208ENST00000588419 ASPRV1Q53RT3 343 aa16.01■□□□□ 0.15
HDAC5-208ENST00000588419 CCDC178Q5BJE1 867 aa16.01■□□□□ 0.15
HDAC5-208ENST00000588419 ENAHQ8N8S7 591 aaPredicted RBP16.01■□□□□ 0.15
HDAC5-208ENST00000588419 TAAR1Q96RJ0 339 aa16.01■□□□□ 0.15
HDAC5-208ENST00000588419 FTOQ9C0B1 505 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDAC5-208ENST00000588419 ACTN1P12814 892 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 EIF2AK2P19525 551 aaKnown RBP16■□□□□ 0.15
HDAC5-208ENST00000588419 AAMPQ13685 434 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 ADGRE1Q14246 886 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 LY6KQ17RY6 165 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 IFIT1BQ5T764 474 aaKnown RBP16■□□□□ 0.15
HDAC5-208ENST00000588419 ARHGEF16Q5VV41 709 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 FBXO11Q86XK2 927 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 RETREG2Q8NC44 543 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 SYTL5Q8TDW5 730 aaPredicted RBP16■□□□□ 0.15
HDAC5-208ENST00000588419 AFG1LQ8WV93 481 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 SYMPKQ92797 1274 aaKnown RBP16■□□□□ 0.15
HDAC5-208ENST00000588419 DSCC1Q9BVC3 393 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 OSBPL3Q9H4L5 887 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 ZSWIM5Q9P217 1185 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 COL20A1Q9P218 1284 aa16■□□□□ 0.15
HDAC5-208ENST00000588419 SORBS3O60504 671 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 KPNA6O60684 536 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 CFBP00751 764 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 GH1P01241 217 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 PFKMP08237 780 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 MMP3P08254 477 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 TJAP1Q5JTD0 557 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 MCF2L2Q86YR7 1114 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 NSUN6Q8TEA1 469 aaKnown RBP15.99■□□□□ 0.15
HDAC5-208ENST00000588419 RMDN3Q96TC7 470 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 KRT23Q9C075 422 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 CERS4Q9HA82 394 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 THEGQ9P2T0 379 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 CTNNA3Q9UI47 895 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 MRPL11Q9Y3B7 192 aaKnown RBP15.99■□□□□ 0.15
HDAC5-208ENST00000588419 VCANP13611 3396 aa15.99■□□□□ 0.15
HDAC5-208ENST00000588419 A6NJR5 290 aa15.98■□□□□ 0.15
HDAC5-208ENST00000588419 STXBP2Q15833 593 aa15.98■□□□□ 0.15
HDAC5-208ENST00000588419 PTGISQ16647 500 aa15.98■□□□□ 0.15
HDAC5-208ENST00000588419 CNNM2Q9H8M5 875 aa15.98■□□□□ 0.15
HDAC5-208ENST00000588419 PCDHA11Q9Y5I1 949 aa15.98■□□□□ 0.15
HDAC5-208ENST00000588419 CA3P07451 260 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 IQCF3P0C7M6 154 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 MYCLP12524 364 aaPredicted RBP15.97■□□□□ 0.15
HDAC5-208ENST00000588419 BFSP2Q13515 415 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 TMEM67Q5HYA8 995 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 HOMER1Q86YM7 354 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 STAG2Q8N3U4 1231 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 RGS22Q8NE09 1264 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 IL27Q8NEV9 243 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 VWCEQ96DN2 955 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 ALG1Q9BT22 464 aa15.97■□□□□ 0.15
HDAC5-208ENST00000588419 IL25Q9H293 177 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms