RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 IGF2BP3O00425 579 aaKnown RBP eCLIP8.34□□□□□ -1.07
TVP23C-208ENST00000581273 NDUFAB1O14561 156 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 HSF2BPO75031 334 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 TAF5LO75529 589 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 ALDH1A1P00352 501 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 FECHP22830 423 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 IGHMBP2P38935 993 aaKnown RBP8.34□□□□□ -1.07
TVP23C-208ENST00000581273 VSNL1P62760 191 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 SP3Q02447 781 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 ITIH3Q06033 890 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 SCRN1Q12765 414 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 CRHR2Q13324 411 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 SLC39A14Q15043 492 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 DLGAP5Q15398 846 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 SNCBQ16143 134 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
TVP23C-208ENST00000581273 C11orf91Q3C1V1 193 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 CEP85LQ5SZL2 805 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 LDLRAD1Q5T700 205 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 CYP26C1Q6V0L0 522 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 ZNF662Q6ZS27 426 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 IQCA1Q86XH1 822 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 APLFQ8IW19 511 aaPredicted RBP8.34□□□□□ -1.07
TVP23C-208ENST00000581273 IGSF22Q8N9C0 903 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 TC2NQ8N9U0 490 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 TTLL11Q8NHH1 800 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 CCHCR1Q8TD31 782 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 WNK4Q96J92 1243 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 PNKPQ96T60 521 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 SH3GL3Q99963 347 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 AGXT2Q9BYV1 514 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 COA1Q9GZY4 146 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 DEFB129Q9H1M3 183 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 HAUS4Q9H6D7 363 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 HOMER3Q9NSC5 361 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 SPATS2LQ9NUQ6 558 aaKnown RBP8.34□□□□□ -1.07
TVP23C-208ENST00000581273 FAM184BQ9ULE4 1060 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 JAG2Q9Y219 1238 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 PCDHAC2Q9Y5I4 1007 aa8.34□□□□□ -1.07
TVP23C-208ENST00000581273 ZSWIM8A7E2V4 1837 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 CACNA1FO60840 1977 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 ZNF804BA4D1E1 1349 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 WDR19Q8NEZ3 1342 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 CCDC189A1A4V9 331 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 ANO9A1A5B4 782 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 SNAP23O00161 211 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 PPP1R12BO60237 982 aaPredicted RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 FARP2O94887 1054 aaPredicted RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 IPO7O95373 1038 aaKnown RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 SYF2O95926 243 aaKnown RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 RHOXF2BP0C7M4 288 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 PFKFB1P16118 471 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 RBM5P52756 815 aaKnown RBP eCLIP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 GNGT1P63211 74 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 KRT83P78385 493 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 AKAP17AQ02040 695 aaKnown RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 NEXNQ0ZGT2 675 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 RBBP5Q15291 538 aaKnown RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 MCMDC2Q4G0Z9 681 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 CCDC38Q502W7 563 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 AP1ARQ63HQ0 302 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 EMBQ6PCB8 327 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 FOXR1Q6PIV2 292 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 PI4KAP1Q8N8J0 262 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 ARMC2Q8NEN0 867 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 HELBQ8NG08 1087 aaPredicted RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 MYLIPQ8WY64 445 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 XAGE2Q96GT9 111 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 RHOXF2Q9BQY4 288 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 JPH2Q9BR39 696 aaPredicted RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 DSCC1Q9BVC3 393 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 MOV10L1Q9BXT6 1211 aaKnown RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 ATP6V0A4Q9HBG4 840 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 KLC4Q9NSK0 619 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 ZNHIT6Q9NWK9 470 aaKnown RBP8.33□□□□□ -1.08
TVP23C-208ENST00000581273 LEMD3Q9Y2U8 911 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
TVP23C-208ENST00000581273 SALL1Q9NSC2 1324 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 KLHL33A6NCF5 533 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 IGKV5-2P06315 115 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 SYN1P17600 705 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 MAGEA10P43363 369 aaPredicted RBP8.32□□□□□ -1.08
TVP23C-208ENST00000581273 INHBEP58166 350 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 KARSQ15046 597 aaKnown RBP8.32□□□□□ -1.08
TVP23C-208ENST00000581273 PPP2R5AQ15172 486 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 CCDC40Q4G0X9 1142 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 EMC10Q5UCC4 262 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 OTUD7BQ6GQQ9 843 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 FAM109BQ6ICB4 259 aaPredicted RBP8.32□□□□□ -1.08
TVP23C-208ENST00000581273 KSR2Q6VAB6 950 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 CCDC121Q6ZUS5 278 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 TOGARAM2Q6ZUX3 1019 aa8.32□□□□□ -1.08
TVP23C-208ENST00000581273 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.32□□□□□ -1.08
TVP23C-208ENST00000581273 N4BP2L2Q92802 583 aaPredicted RBP8.32□□□□□ -1.08
TVP23C-208ENST00000581273 IQCDQ96DY2 449 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms