RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 KRT25Q7Z3Z0 450 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 DNERQ8NFT8 737 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 FGD4Q96M96 766 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 NUDT12Q9BQG2 462 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 MCM3APO60318 1980 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 ASTN1O14525 1302 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 FRMPD4Q14CM0 1322 aa18.18■□□□□ 0.5
CSNK1D-212ENST00000580061 CCDC194A0A1B0GVG4 234 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 FOXN1O15353 648 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 BRD1O95696 1058 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 HSPA1AP0DMV8 641 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 HSPA1BP0DMV9 641 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 ZSCAN22P10073 491 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 RESTQ13127 1097 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 PIK3AP1Q6ZUJ8 805 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 FERMT3Q86UX7 667 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 NOSTRINQ8IVI9 506 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 PXMP2Q9NR77 195 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 ADD3Q9UEY8 706 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 CIZ1Q9ULV3 898 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 ZDHHC9Q9Y397 364 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 RPTORQ8N122 1335 aa18.17■□□□□ 0.5
CSNK1D-212ENST00000580061 FAM205CA6NFA0 338 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 GNRH1P01148 92 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 HOXC6P09630 235 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 HSPA8P11142 646 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 SREBF1P36956 1147 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 RGS2P41220 211 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 ALDH5A1P51649 535 aaPredicted RBP18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 NUCB2P80303 420 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 ARHGEF6Q15052 776 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.53e-6■■■□□ 16.9
CSNK1D-212ENST00000580061 ARHGEF16Q5VV41 709 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 NPLOC4Q8TAT6 608 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 NSUN6Q8TEA1 469 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 EHMT1Q9H9B1 1298 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 SLC5A4Q9NY91 659 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 GABRQQ9UN88 632 aa18.16■□□□□ 0.5
CSNK1D-212ENST00000580061 F13A1P00488 732 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 EIF2AK2P19525 551 aaKnown RBP18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 HOXD10P28358 340 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 PRKCZQ05513 592 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 ZNF467Q7Z7K2 595 aaPredicted RBP18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 TBCKQ8TEA7 893 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 CRYGNQ8WXF5 182 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 MAML3Q96JK9 1138 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 PDCD2LQ9BRP1 358 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 ZSCAN16Q9H4T2 348 aaPredicted RBP18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 SRRDQ9UH36 339 aa18.15■□□□□ 0.5
CSNK1D-212ENST00000580061 KIAA1217Q5T5P2 1943 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 LOC102724159A0A0B4J2E5 919 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 EDIL3O43854 480 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 CYP2B6P20813 491 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 EDNRBP24530 442 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 FLT3LGP49771 235 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 UBXN2AP68543 259 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 PGM5Q15124 567 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 PWP2Q15269 919 aaKnown RBP18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 INF2Q27J81 1249 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 FOXD4L5Q5VV16 416 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 BRAPQ7Z569 592 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 FOXD4L4Q8WXT5 416 aaPredicted RBP18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 IWS1Q96ST2 819 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 APBA2Q99767 749 aa18.14■□□□□ 0.49
CSNK1D-212ENST00000580061 XRCC5P13010 732 aaKnown RBP18.13■□□□□ 0.49
CSNK1D-212ENST00000580061 CTCFP49711 727 aaPredicted RBP18.13■□□□□ 0.49
CSNK1D-212ENST00000580061 ARHGAP4P98171 946 aa18.13■□□□□ 0.49
CSNK1D-212ENST00000580061 MAMDC4Q6UXC1 1216 aa18.13■□□□□ 0.49
CSNK1D-212ENST00000580061 IL31RAQ8NI17 732 aa18.13■□□□□ 0.49
CSNK1D-212ENST00000580061 CHMP5Q9NZZ3 219 aa18.13■□□□□ 0.49
CSNK1D-212ENST00000580061 B4DLN1 442 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 NR3C2P08235 984 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 CYP3A4P08684 503 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 USP11P51784 963 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 IRF5Q13568 498 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 PCNX4Q63HM2 1172 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 OTOP1Q7RTM1 612 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 NEK8Q86SG6 692 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 VSIG10LQ86VR7 867 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 MORC4Q8TE76 937 aa18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 MPHOSPH6Q99547 160 aaKnown RBP18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 DDX49Q9Y6V7 483 aaKnown RBP18.12■□□□□ 0.49
CSNK1D-212ENST00000580061 ASB14A6NK59 587 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 MYCLP12524 364 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 CCND2P30279 289 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 TRAPPC10P48553 1259 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 TOB1P50616 345 aaPredicted RBP18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 LBX1P52954 281 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 PRMT2P55345 433 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 MRPS9P82933 396 aaKnown RBP18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 CCL14Q16627 93 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 RILPL1Q5EBL4 403 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 MYSM1Q5VVJ2 828 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 OLFML2BQ68BL8 750 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 XRRA1Q6P2D8 792 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 FAM173BQ6P4H8 233 aa18.11■□□□□ 0.49
CSNK1D-212ENST00000580061 MSL3Q8N5Y2 521 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms