RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 TRANK1O15050 2925 aa11.85□□□□□ -0.51
CTC1-204ENST00000578441 FRMPD2Q68DX3 1309 aaPredicted RBP11.85□□□□□ -0.51
CTC1-204ENST00000578441 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
CTC1-204ENST00000578441 CALML3P27482 149 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 NMIQ13287 307 aaPredicted RBP11.84□□□□□ -0.51
CTC1-204ENST00000578441 ADGRE1Q14246 886 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 TTLL4Q14679 1199 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 TMEM63BQ5T3F8 832 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 PHOSPHO2Q8TCD6 241 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
CTC1-204ENST00000578441 SLC9A7Q96T83 725 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 NKX2-4Q9H2Z4 354 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 TRMT13Q9NUP7 481 aaKnown RBP11.84□□□□□ -0.51
CTC1-204ENST00000578441 HCN4Q9Y3Q4 1203 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 DDX49Q9Y6V7 483 aaKnown RBP11.84□□□□□ -0.51
CTC1-204ENST00000578441 CHD7Q9P2D1 2997 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 ABCB11O95342 1321 aa11.84□□□□□ -0.51
CTC1-204ENST00000578441 ZNF213O14771 459 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 BAIAP3O94812 1187 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 PARNO95453 639 aaKnown RBP11.83□□□□□ -0.52
CTC1-204ENST00000578441 MYL3P08590 195 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 TXNP10599 105 aaKnown RBP11.83□□□□□ -0.52
CTC1-204ENST00000578441 POU3F3P20264 500 aaPredicted RBP11.83□□□□□ -0.52
CTC1-204ENST00000578441 BFSP2Q13515 415 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 ASPRV1Q53RT3 343 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
CTC1-204ENST00000578441 SESTD1Q86VW0 696 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 MCF2L2Q86YR7 1114 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 SMC5Q8IY18 1101 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 CCDC155Q8N6L0 562 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 ANKS1AQ92625 1134 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 IWS1Q96ST2 819 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
CTC1-204ENST00000578441 YBX2Q9Y2T7 364 aaKnown RBP11.83□□□□□ -0.52
CTC1-204ENST00000578441 KIAA1217Q5T5P2 1943 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 ZBBXA8MT70 800 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 HIP1O00291 1037 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 CYP2C9P11712 490 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 PTGS1P23219 599 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 NBPF20Q3BBV1 942 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 TMEM67Q5HYA8 995 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 RETREG2Q8NC44 543 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 CAGE1Q8TC20 777 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 NSUN6Q8TEA1 469 aaKnown RBP11.82□□□□□ -0.52
CTC1-204ENST00000578441 PPM1EQ8WY54 764 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 VWCEQ96DN2 955 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 SCLYQ96I15 445 aa11.82□□□□□ -0.52
CTC1-204ENST00000578441 IQCF3P0C7M6 154 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 SDSP20132 328 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 IGFBP4P22692 258 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 HAND2P61296 217 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 RBL2Q08999 1139 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 STXBP2Q15833 593 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 FAM47CQ5HY64 1035 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 CCDC62Q6P9F0 684 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 TBC1D10CQ8IV04 446 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 AFAP1L1Q8TED9 768 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
CTC1-204ENST00000578441 CRBNQ96SW2 442 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 DSCC1Q9BVC3 393 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 RWDD1Q9H446 243 aaPredicted RBP11.81□□□□□ -0.52
CTC1-204ENST00000578441 KAT14Q9H8E8 782 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 CNNM2Q9H8M5 875 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 MAP3K20Q9NYL2 800 aaKnown RBP11.81□□□□□ -0.52
CTC1-204ENST00000578441 NOD1Q9Y239 953 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 NEDD4P46934 1319 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 SCN5AQ14524 2016 aa11.81□□□□□ -0.52
CTC1-204ENST00000578441 MUC6Q6W4X9 2439 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 MYH6P13533 1939 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 KIF28PB7ZC32 967 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 GH1P01241 217 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 CDC37Q16543 378 aaPredicted RBP11.8□□□□□ -0.52
CTC1-204ENST00000578441 USH1GQ495M9 461 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 SAMD3Q8N6K7 520 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 RILPL2Q969X0 211 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 ZSCAN10Q96SZ4 725 aaPredicted RBP11.8□□□□□ -0.52
CTC1-204ENST00000578441 LRFN3Q9BTN0 628 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 KATNAL1Q9BW62 490 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 CTNNA3Q9UI47 895 aa11.8□□□□□ -0.52
CTC1-204ENST00000578441 MRPL11Q9Y3B7 192 aaKnown RBP11.8□□□□□ -0.52
CTC1-204ENST00000578441 GTPBP6O43824 516 aaPredicted RBP11.79□□□□□ -0.52
CTC1-204ENST00000578441 GPR37L1O60883 481 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 KDM4AO75164 1064 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 CA3P07451 260 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 MMP3P08254 477 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 CASTP20810 708 aaKnown RBP11.79□□□□□ -0.52
CTC1-204ENST00000578441 RABGGTBP53611 331 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 GHRHRQ02643 423 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 TRAF1Q13077 416 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 PTGISQ16647 500 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 DGKDQ16760 1214 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
CTC1-204ENST00000578441 KCNV1Q6PIU1 500 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 DEFB128Q7Z7B8 93 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 CHD1LQ86WJ1 897 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 HERC6Q8IVU3 1022 aa11.79□□□□□ -0.52
CTC1-204ENST00000578441 ADGRF4Q8IZF3 695 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms