RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PALM2Q8IXS6 379 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 ZNF654Q8IZM8 581 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 NECAB1Q8N987 351 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 POMGNT1Q8WZA1 660 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 SEPT8Q92599 483 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 PHKBQ93100 1093 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 SKA1Q96BD8 255 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 SPATA33Q96N06 139 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 ESYT1Q9BSJ8 1104 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 TEX13BQ9BXU2 312 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 LSM7Q9UK45 103 aaKnown RBP3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 PPP2R3BQ9Y5P8 575 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 SLC4A7Q9Y6M7 1214 aa3.23□□□□□ -1.89
SMCHD1-203ENST00000577880 KDRP35968 1356 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SPDYE2BA6NHP3 402 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 RBAK-RBAKDNI3L0D1 243 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PLSCR1O15162 318 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SPOPO43791 374 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 N4BP1O75113 896 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CAVIN2O95810 425 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 GH1P01241 217 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SPDYE6P0CI01 402 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SRGAP2CP0DJJ0 459 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 NASPP49321 788 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 LRRC24Q50LG9 513 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 RGMBQ6NW40 437 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 GLB1LQ6UWU2 654 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PPP1R21Q6ZMI0 780 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ADAT2Q7Z6V5 191 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 NEK8Q86SG6 692 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DIS3L2Q8IYB7 885 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SIX6OS1Q8N1H7 587 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SH3TC2Q8TF17 1288 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DCAF4Q8WV16 495 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PPP1R16BQ96T49 567 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CARD14Q9BXL6 1004 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 RPF1Q9H9Y2 349 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 GPR108Q9NPR9 543 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 KMT5AQ9NQR1 393 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 GINM1Q9NU53 330 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 FAM8A1Q9UBU6 413 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PRRG1O14668 218 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ENTPD3O75355 529 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 TADA2AO75478 443 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DDAH1O94760 285 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 TBC1D8O95759 1140 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 GCFC2P16383 781 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 MCM3P25205 808 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ALDH7A1P49419 539 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 JAK3P52333 1124 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SP3Q02447 781 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CKAP4Q07065 602 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PTPAQ15257 358 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 STX1AQ16623 288 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 FAM83BQ5T0W9 1011 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CES5AQ6NT32 575 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 SCYL2Q6P3W7 929 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 NECAB2Q7Z6G3 386 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CABP7Q86V35 215 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 BLIDQ8IZY5 108 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 GPC2Q8N158 579 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 TRIML1Q8N9V2 468 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 LPAR1Q92633 364 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 RPAP3Q9H6T3 665 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 COPRSQ9NQ92 184 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DISC1Q9NRI5 854 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 EVA1BQ9NVM1 165 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 BCCIPQ9P287 314 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ZNF70Q9UC06 446 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DDX25Q9UHL0 483 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ANAPC5Q9UJX4 755 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 MINPP1Q9UNW1 487 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PCDHB7Q9Y5E2 793 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PCDHB12Q9Y5F1 795 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 C1orf167Q5SNV9 1468 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 TNKSO95271 1327 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ABCB11O95342 1321 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ATRNO75882 1429 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 USP32Q8NFA0 1604 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 K7ERI5 159 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 RNF8O76064 485 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ARHGAP4P98171 946 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 RAD51AP2Q09MP3 1159 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PTPROQ16827 1216 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 HADHQ16836 314 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CYP4A22Q5TCH4 519 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ISM2Q6H9L7 571 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DYMQ7RTS9 669 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 TADA2BQ86TJ2 420 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 UCMAQ8WVF2 138 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 FAM151AQ8WW52 585 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 PSPC1Q8WXF1 523 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CCDC42Q96M95 316 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 NCAPGQ9BPX3 1015 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DDX50Q9BQ39 737 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 CRACR2AQ9BSW2 395 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 DCTPP1Q9H773 170 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 ENTPD7Q9NQZ7 604 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 TNNQ9UQP3 1299 aa3.22□□□□□ -1.89
SMCHD1-203ENST00000577880 TULP4Q9NRJ4 1543 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms