RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZNF771Q7L3S4 317 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 ENAHQ8N8S7 591 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 MLKLQ8NB16 471 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 ZNF397Q8NF99 534 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 TJP1Q07157 1748 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 PNPLA7Q6ZV29 1317 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 STRCP1A6NGW2 1772 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 PARP4Q9UKK3 1724 aaKnown RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 ZSCAN12O43309 604 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 BMP6P22004 513 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 MCM7P33993 719 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 KANK3Q6NY19 840 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 LIAT1Q6ZQX7 453 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 PPFIBP1Q86W92 1011 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 VSTM4Q8IW00 320 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 MARCH10Q8NA82 808 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 CELF1Q92879 486 aaKnown RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 BAG1Q99933 345 aaPredicted RBP6.06□□□□□ -1.44
VAPA-203ENST00000577539 DESI2Q9BSY9 194 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 AK5Q9Y6K8 562 aa6.06□□□□□ -1.44
VAPA-203ENST00000577539 A6NHS1 94 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 CYP2D6P10635 497 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 ARHGAP29Q52LW3 1261 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 PIK3AP1Q6ZUJ8 805 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 NBPF5PQ86XG9 351 aaPredicted RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 DZIP1Q86YF9 867 aaKnown RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 FEZ1Q99689 392 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 RNF26Q9BY78 433 aaPredicted RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 CRNKL1Q9BZJ0 848 aaKnown RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 BLZF1Q9H2G9 400 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 MCM9Q9NXL9 1143 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 SRPRBQ9Y5M8 271 aaKnown RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 KLRK1P26718 216 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 GNA15P30679 374 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 PIP4K2BP78356 416 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 FILIP1LQ4L180 1135 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 EARS2Q5JPH6 523 aaKnown RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 TTC38Q5R3I4 469 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 FBXO38Q6PIJ6 1188 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 GLIS3Q8NEA6 775 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 ARMC5Q96C12 935 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 NLRP3Q96P20 1036 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 CARD6Q9BX69 1037 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 HSD3B7Q9H2F3 369 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 ZSWIM4Q9H7M6 989 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 OGFRQ9NZT2 677 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 MINPP1Q9UNW1 487 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 MAPK8IP1Q9UQF2 711 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.05□□□□□ -1.44
VAPA-203ENST00000577539 ATRNO75882 1429 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 CDC25AP30304 524 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 HIBADHP31937 336 aaKnown RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 USP5P45974 858 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 UBE4AQ14139 1066 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 TEX35Q5T0J7 233 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 SPECC1LQ69YQ0 1117 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 VASH1Q7L8A9 365 aaPredicted RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 LRRN4CLQ8ND94 238 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 DHX38Q92620 1227 aaKnown RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 FAM84BQ96KN1 310 aaPredicted RBP6.05□□□□□ -1.44
VAPA-203ENST00000577539 NIF3L1Q9GZT8 377 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 PCDHGB7Q9Y5F8 929 aa6.05□□□□□ -1.44
VAPA-203ENST00000577539 SPEF2Q9C093 1822 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 PNMA6FA0A0J9YX94 578 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 ARHGAP6O43182 974 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 PRDX5P30044 214 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 CASQ1P31415 396 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 TXLNAP40222 546 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 CCT6AP40227 531 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 RPS8P62241 208 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 PLCB3Q01970 1234 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 SERINC3Q13530 473 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 SYCP1Q15431 976 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 RRAGBQ5VZM2 374 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 ALDH16A1Q8IZ83 802 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 ANKLE1Q8NAG6 615 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 PLIN2Q99541 437 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 SRP68Q9UHB9 627 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 PPP2R2CQ9Y2T4 447 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 TPM1P09493 284 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 NOS2P35228 1153 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 MECOMQ03112 1051 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 SEC23AQ15436 765 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 ENOX1Q8TC92 643 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 SMARCC1Q92922 1105 aaPredicted RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 KCTD12Q96CX2 325 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 CHRDQ9H2X0 955 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 MKNK2Q9HBH9 465 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 LZTFL1Q9NQ48 299 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 RBM28Q9NW13 759 aaKnown RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 KLK14Q9P0G3 267 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 ANKIB1Q9P2G1 1089 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 PPP1R1BQ9UD71 204 aaPredicted RBP6.04□□□□□ -1.44
VAPA-203ENST00000577539 NUP188Q5SRE5 1749 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 NWD2Q9ULI1 1742 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 N4BP3O15049 544 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 TEX33O43247 280 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 SORBS3O60504 671 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 CALM1P0DP23 149 aa6.04□□□□□ -1.44
VAPA-203ENST00000577539 CALM2P0DP24 149 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms