RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 MASTLQ96GX5 879 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 ZSCAN31Q96LW9 406 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-210ENST00000567654 RBCK1Q9BYM8 510 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 SH2B1Q9NRF2 756 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-210ENST00000567654 AATFQ9NY61 560 aaKnown RBP eCLIP6.75□□□□□ -1.33
SF3B3-210ENST00000567654 CTNNA3Q9UI47 895 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 DICER1Q9UPY3 1922 aaKnown RBP6.75□□□□□ -1.33
SF3B3-210ENST00000567654 ATAD5Q96QE3 1844 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 SBF1O95248 1867 aa6.75□□□□□ -1.33
SF3B3-210ENST00000567654 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 PFKFB2O60825 505 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 PHACTR2O75167 634 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 CYP2D6P10635 497 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 SYT1P21579 422 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 ALAS2P22557 587 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 CES1P23141 567 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 PDE6BP35913 854 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 BAG6P46379 1132 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 NRLP54845 237 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 GPLD1P80108 840 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 NUCB2P80303 420 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 ATP11AP98196 1134 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 PSAPL1Q6NUJ1 521 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 ZNF804AQ7Z570 1209 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 NCOA7Q8NI08 942 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 ZNF622Q969S3 477 aaKnown RBP eCLIP6.74□□□□□ -1.33
SF3B3-210ENST00000567654 MXD3Q9BW11 206 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 NAPBQ9H115 298 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 EFCC1Q9HA90 598 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 NCOA5Q9HCD5 579 aaKnown RBP6.74□□□□□ -1.33
SF3B3-210ENST00000567654 LATS2Q9NRM7 1088 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 SMC3Q9UQE7 1217 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 MTMR6Q9Y217 621 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 CNTNAP5Q8WYK1 1306 aa6.74□□□□□ -1.33
SF3B3-210ENST00000567654 PHF20L1A8MW92 1017 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 M0R082 166 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 SH2B2O14492 632 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 HMGB1P09429 215 aaKnown RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 HMGB2P26583 209 aaKnown RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 PDIA3P30101 505 aaKnown RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 TDO2P48775 406 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 CCT2P78371 535 aaKnown RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 PPARAQ07869 468 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 EHHADHQ08426 723 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 ANKRD1Q15327 319 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 SLC4A8Q2Y0W8 1093 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 FOXD4L6Q3SYB3 417 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 STYK1Q6J9G0 422 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 FOXD4L3Q6VB84 417 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 CDC37L1Q7L3B6 337 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 CERS5Q8N5B7 392 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 NSUN7Q8NE18 718 aaKnown RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 SMARCC2Q8TAQ2 1214 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 ZNF417Q8TAU3 575 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 SH3RF3Q8TEJ3 882 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 SNX29Q8TEQ0 813 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 STAG1Q8WVM7 1258 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 ZNF587Q96SQ5 575 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 LPIN3Q9BQK8 851 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 RTFDC1Q9BY42 306 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 SMG9Q9H0W8 520 aaKnown RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 JPH1Q9HDC5 661 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 KCNQ5Q9NR82 932 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-210ENST00000567654 MROH7-TTC4A0A0A0MT08 1334 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 FAM205AQ6ZU69 1335 aa6.73□□□□□ -1.33
SF3B3-210ENST00000567654 POLR2AP24928 1970 aaKnown RBP6.72□□□□□ -1.33
SF3B3-210ENST00000567654 KLF18A0A0U1RQI7 1052 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 MINDY4BA8MYZ0 360 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 H0YIN7 160 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 STX6O43752 255 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ZSCAN22P10073 491 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-210ENST00000567654 GNAT2P19087 354 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 RXRAP19793 462 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 KCNA3P22001 575 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ALDH1B1P30837 517 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 MCM5P33992 734 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 SOX18P35713 384 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 EVCP57679 992 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 AKNAD1Q5T1N1 836 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 MCTP1Q6DN14 999 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 CTR9Q6PD62 1173 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ELMSAN1Q6PJG2 1045 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ADAMTSL4Q6UY14 1074 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 DPP8Q6V1X1 898 aaPredicted RBP6.72□□□□□ -1.33
SF3B3-210ENST00000567654 TMC4Q7Z404 712 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 RALYLQ86SE5 291 aaKnown RBP6.72□□□□□ -1.33
SF3B3-210ENST00000567654 NCAPG2Q86XI2 1143 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 DZIP1Q86YF9 867 aaKnown RBP6.72□□□□□ -1.33
SF3B3-210ENST00000567654 MICALL1Q8N3F8 863 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 FBXL16Q8N461 479 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 WDR66Q8TBY9 1149 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 IGDCC4Q8TDY8 1250 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 GBP4Q96PP9 640 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ZKSCAN3Q9BRR0 538 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 LY9Q9HBG7 655 aa6.72□□□□□ -1.33
SF3B3-210ENST00000567654 ZFYVE28Q9HCC9 887 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms