RNA–Protein interactions for RNA: ENST00000566398.1

CPNE7-208, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-208ENST00000566398 TRIM43BA6NCK2 446 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 NKRFO15226 690 aaKnown RBP eCLIP22■■□□□ 1.11
CPNE7-208ENST00000566398 CABYRO75952 493 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 CALM1P0DP23 149 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 CALM2P0DP24 149 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 CALM3P0DP25 149 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 GNAQP50148 359 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 KRT32Q14532 448 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 ARHGEF16Q5VV41 709 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 SH3RF1Q7Z6J0 888 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 OR6J1Q8NGC5 347 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 TRIM43Q96BQ3 446 aaPredicted RBP22■■□□□ 1.11
CPNE7-208ENST00000566398 IWS1Q96ST2 819 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 LZTS2Q9BRK4 669 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 SPZ1Q9BXG8 430 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 LRRC2Q9BYS8 371 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 SLC12A7Q9Y666 1083 aa22■■□□□ 1.11
CPNE7-208ENST00000566398 ARVCFO00192 962 aa21.99■■□□□ 1.11
CPNE7-208ENST00000566398 EIF2AK2P19525 551 aaKnown RBP21.99■■□□□ 1.11
CPNE7-208ENST00000566398 CPT1AP50416 773 aa21.99■■□□□ 1.11
CPNE7-208ENST00000566398 SAMD3Q8N6K7 520 aa21.99■■□□□ 1.11
CPNE7-208ENST00000566398 PIBF1Q8WXW3 757 aa21.99■■□□□ 1.11
CPNE7-208ENST00000566398 RRP36Q96EU6 259 aaKnown RBP21.99■■□□□ 1.11
CPNE7-208ENST00000566398 PXMP2Q9NR77 195 aa21.99■■□□□ 1.11
CPNE7-208ENST00000566398 TMEM39AQ9NV64 488 aa21.99■■□□□ 1.11
CPNE7-208ENST00000566398 MAP3K20Q9NYL2 800 aaKnown RBP21.99■■□□□ 1.11
CPNE7-208ENST00000566398 KIAA0355O15063 1070 aa21.98■■□□□ 1.11
CPNE7-208ENST00000566398 TXNP10599 105 aaKnown RBP21.98■■□□□ 1.11
CPNE7-208ENST00000566398 FAAP100Q0VG06 881 aa21.98■■□□□ 1.11
CPNE7-208ENST00000566398 TTLL4Q14679 1199 aa21.98■■□□□ 1.11
CPNE7-208ENST00000566398 STXBP2Q15833 593 aa21.98■■□□□ 1.11
CPNE7-208ENST00000566398 BADQ92934 168 aa21.98■■□□□ 1.11
CPNE7-208ENST00000566398 SEC63Q9UGP8 760 aaKnown RBP21.98■■□□□ 1.11
CPNE7-208ENST00000566398 GCOM1H8Y6P7 765 aaPredicted RBP21.97■■□□□ 1.11
CPNE7-208ENST00000566398 PLEKHA8P1O95397 391 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 POLR2MP0CAP2 368 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 RXRAP19793 462 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 SMARCA1P28370 1054 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 HOXA13P31271 388 aaPredicted RBP21.97■■□□□ 1.11
CPNE7-208ENST00000566398 CDK7P50613 346 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 TSGA10IPQ3SY00 556 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 BRDTQ58F21 947 aaPredicted RBP21.97■■□□□ 1.11
CPNE7-208ENST00000566398 SGMS1Q86VZ5 419 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 MICU3Q86XE3 530 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 RASEFQ8IZ41 740 aa21.97■■□□□ 1.11
CPNE7-208ENST00000566398 TLR3O15455 904 aaKnown RBP21.96■■□□□ 1.11
CPNE7-208ENST00000566398 RAG1P15918 1043 aa21.96■■□□□ 1.11
CPNE7-208ENST00000566398 SYNE3Q6ZMZ3 975 aa21.96■■□□□ 1.11
CPNE7-208ENST00000566398 SEPT14Q6ZU15 432 aa21.96■■□□□ 1.11
CPNE7-208ENST00000566398 DHX32Q7L7V1 743 aaKnown RBP21.96■■□□□ 1.11
CPNE7-208ENST00000566398 RAB11FIP4Q86YS3 637 aa21.96■■□□□ 1.11
CPNE7-208ENST00000566398 POLR3EQ9NVU0 708 aa21.96■■□□□ 1.11
CPNE7-208ENST00000566398 SOX1O00570 391 aaPredicted RBP21.95■■□□□ 1.1
CPNE7-208ENST00000566398 EIF3JO75822 258 aaKnown RBP21.95■■□□□ 1.1
CPNE7-208ENST00000566398 REC8O95072 547 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 ARIH2O95376 493 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 NR3C2P08235 984 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 HMGB1P09429 215 aaKnown RBP21.95■■□□□ 1.1
CPNE7-208ENST00000566398 ITGA7Q13683 1181 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 ADCK5Q3MIX3 580 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 LRIT3Q3SXY7 679 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 FAM126BQ8IXS8 530 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 SRBD1Q8N5C6 995 aaKnown RBP21.95■■□□□ 1.1
CPNE7-208ENST00000566398 COPS5Q92905 334 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 PDCD2LQ9BRP1 358 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 SEZ6LQ9BYH1 1024 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 PPP4R2Q9NY27 417 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 TBX21Q9UL17 535 aa21.95■■□□□ 1.1
CPNE7-208ENST00000566398 CENPBP07199 599 aaPredicted RBP21.94■■□□□ 1.1
CPNE7-208ENST00000566398 MYL3P08590 195 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 ITGB8P26012 769 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 EXOSC10Q01780 885 aaKnown RBP21.94■■□□□ 1.1
CPNE7-208ENST00000566398 ERICH6BQ5W0A0 696 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 CCDC62Q6P9F0 684 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 FCHSD1Q86WN1 690 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 FANCBQ8NB91 859 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 SLC43A3Q8NBI5 491 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 TCEANC2Q96MN5 208 aa21.94■■□□□ 1.1
CPNE7-208ENST00000566398 PSMC6P62333 389 aa21.93■■□□□ 1.1
CPNE7-208ENST00000566398 PURAQ00577 322 aaKnown RBP21.93■■□□□ 1.1
CPNE7-208ENST00000566398 APOA5Q6Q788 366 aa21.93■■□□□ 1.1
CPNE7-208ENST00000566398 TMTC3Q6ZXV5 915 aa21.93■■□□□ 1.1
CPNE7-208ENST00000566398 CMTR1Q8N1G2 835 aaKnown RBP21.93■■□□□ 1.1
CPNE7-208ENST00000566398 LRCH3Q96II8 777 aa21.93■■□□□ 1.1
CPNE7-208ENST00000566398 MRVI1Q9Y6F6 885 aa21.93■■□□□ 1.1
CPNE7-208ENST00000566398 SZT2Q5T011 3432 aa21.93■■□□□ 1.1
CPNE7-208ENST00000566398 GRIN2DO15399 1336 aa21.92■■□□□ 1.1
CPNE7-208ENST00000566398 A6NJR5 290 aa21.92■■□□□ 1.1
CPNE7-208ENST00000566398 KPNA6O60684 536 aa21.92■■□□□ 1.1
CPNE7-208ENST00000566398 GH1P01241 217 aa21.92■■□□□ 1.1
CPNE7-208ENST00000566398 MYCLP12524 364 aaPredicted RBP21.92■■□□□ 1.1
CPNE7-208ENST00000566398 PGM5Q15124 567 aa21.92■■□□□ 1.1
CPNE7-208ENST00000566398 LY6KQ17RY6 165 aa21.92■■□□□ 1.1
CPNE7-208ENST00000566398 MTG1Q9BT17 334 aaPredicted RBP21.92■■□□□ 1.1
CPNE7-208ENST00000566398 ZBTB43O43298 467 aa21.91■■□□□ 1.1
CPNE7-208ENST00000566398 TIMP1P01033 207 aa21.91■■□□□ 1.1
CPNE7-208ENST00000566398 CCND2P30279 289 aa21.91■■□□□ 1.1
CPNE7-208ENST00000566398 HSPA4P34932 840 aa21.91■■□□□ 1.1
CPNE7-208ENST00000566398 FGD1P98174 961 aa21.91■■□□□ 1.1
CPNE7-208ENST00000566398 FPGSQ05932 587 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms