RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 RABGGTBP53611 331 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 FOXK2Q01167 660 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 PUM3Q15397 648 aaKnown RBP7.44□□□□□ -1.22
UBFD1-204ENST00000565634 ERICH6BQ5W0A0 696 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 C16orf59Q7L2K0 433 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 GPR142Q7Z601 462 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 NPLOC4Q8TAT6 608 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 PI4K2BQ8TCG2 481 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 ZNF384Q8TF68 577 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 LPIN2Q92539 896 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 USP6NLQ92738 828 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 TRERF1Q96PN7 1200 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 ESYT1Q9BSJ8 1104 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 NUCKS1Q9H1E3 243 aaKnown RBP7.44□□□□□ -1.22
UBFD1-204ENST00000565634 BOLA2Q9H3K6 86 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 GPR108Q9NPR9 543 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 HMG20BQ9P0W2 317 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 RBPJLQ9UBG7 517 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 DDX20Q9UHI6 824 aaKnown RBP7.44□□□□□ -1.22
UBFD1-204ENST00000565634 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 CHD7Q9P2D1 2997 aa7.44□□□□□ -1.22
UBFD1-204ENST00000565634 XIRP2A4UGR9 3374 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 PQBP1O60828 265 aaKnown RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 CYP2E1P05181 493 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 SLC5A1P13866 664 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 GCLCP48506 637 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 PDE1AP54750 535 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 HDLBPQ00341 1268 aaKnown RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 PICALMQ13492 652 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 SHROOM1Q2M3G4 852 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 TSGA10IPQ3SY00 556 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 FKBP1CQ5VVH2 108 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 SND1Q7KZF4 910 aaKnown RBP eCLIP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 CENPQQ7L2Z9 268 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 CCAR1Q8IX12 1150 aaKnown RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 CLASRPQ8N2M8 674 aaKnown RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 BEND7Q8N7W2 519 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 NEDD1Q8NHV4 660 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 LPAR1Q92633 364 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 VRTNQ9H8Y1 702 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 PIH1D3Q9NQM4 214 aaKnown RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 CXXC1Q9P0U4 656 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 YBX2Q9Y2T7 364 aaKnown RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 MAFBQ9Y5Q3 323 aaPredicted RBP7.43□□□□□ -1.22
UBFD1-204ENST00000565634 CHD9Q3L8U1 2897 aa7.43□□□□□ -1.22
UBFD1-204ENST00000565634 DNM1LO00429 736 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 IFIT2P09913 472 aaKnown RBP7.42□□□□□ -1.22
UBFD1-204ENST00000565634 IFIT1P09914 478 aaKnown RBP7.42□□□□□ -1.22
UBFD1-204ENST00000565634 XRCC5P13010 732 aaKnown RBP7.42□□□□□ -1.22
UBFD1-204ENST00000565634 GSPT1P15170 499 aaKnown RBP7.42□□□□□ -1.22
UBFD1-204ENST00000565634 RGS2P41220 211 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 PHKA2P46019 1235 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 ATP2B2Q01814 1243 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 FPGSQ05932 587 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 PLA2G4EQ3MJ16 856 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 HSP90AB4PQ58FF6 505 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 HHIPL2Q6UWX4 724 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 PLEKHH3Q7Z736 793 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 ERC1Q8IUD2 1116 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 GPRC5AQ8NFJ5 357 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 CWC22Q9HCG8 908 aaKnown RBP7.42□□□□□ -1.22
UBFD1-204ENST00000565634 GPAMQ9HCL2 828 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 DDX4Q9NQI0 724 aaKnown RBP7.42□□□□□ -1.22
UBFD1-204ENST00000565634 TMEM39AQ9NV64 488 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 AKAP2Q9Y2D5 859 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 MYO7AQ13402 2215 aa7.42□□□□□ -1.22
UBFD1-204ENST00000565634 ZNF318Q5VUA4 2279 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 CFAP54Q96N23 3096 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 LOC285556D6RIA3 1793 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 OIP5O43482 229 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 CTNND1O60716 968 aaKnown RBP7.41□□□□□ -1.22
UBFD1-204ENST00000565634 ATG7O95352 703 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 CLTBP09497 229 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 ATP5JP18859 108 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 ARID4AP29374 1257 aaPredicted RBP7.41□□□□□ -1.22
UBFD1-204ENST00000565634 PRDX5P30044 214 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 IRX3P78415 501 aaPredicted RBP7.41□□□□□ -1.22
UBFD1-204ENST00000565634 JAG1P78504 1218 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 UBAP2LQ14157 1087 aaKnown RBP7.41□□□□□ -1.22
UBFD1-204ENST00000565634 TMEM240Q5SV17 173 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 GORABQ5T7V8 394 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 MFSD14CQ5VZR4 134 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 ZNF365Q70YC5 407 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 ZNF592Q92610 1267 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 MORF4L1Q9UBU8 362 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 TACC3Q9Y6A5 838 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 CACNA1BQ00975 2339 aa7.41□□□□□ -1.22
UBFD1-204ENST00000565634 KBTBD13C9JR72 458 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 PI4K2BG5E9Z4 385 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 PIK3CDO00329 1044 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 GOLIM4O00461 696 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 STAU1O95793 577 aaKnown RBP7.4□□□□□ -1.22
UBFD1-204ENST00000565634 MX1P20591 662 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 HERVK_113P62684 666 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 ERVK-24P63145 666 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 LRRC41Q15345 812 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 TTC39AQ5SRH9 613 aa7.4□□□□□ -1.22
UBFD1-204ENST00000565634 C1orf229Q6ZS94 237 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-204ENST00000565634 PHTF2Q8N3S3 785 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms