RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ADGRE1Q14246 886 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 TTLL4Q14679 1199 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 IQCA1Q86XH1 822 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 MICALL1Q8N3F8 863 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 COPS5Q92905 334 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 KAT14Q9H8E8 782 aa15.21■□□□□ 0.03
SF3B3-202ENST00000562722 KDM4AO75164 1064 aa15.2■□□□□ 0.02
SF3B3-202ENST00000562722 MYOGP15173 224 aa15.2■□□□□ 0.02
SF3B3-202ENST00000562722 EDNRBP24530 442 aa15.2■□□□□ 0.02
SF3B3-202ENST00000562722 CDC37Q16543 378 aaPredicted RBP15.2■□□□□ 0.02
SF3B3-202ENST00000562722 CCDC178Q5BJE1 867 aa15.2■□□□□ 0.02
SF3B3-202ENST00000562722 CWC27Q6UX04 472 aaKnown RBP15.2■□□□□ 0.02
SF3B3-202ENST00000562722 DGKHQ86XP1 1220 aa15.2■□□□□ 0.02
SF3B3-202ENST00000562722 PNMA1Q8ND90 353 aa15.2■□□□□ 0.02
SF3B3-202ENST00000562722 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
SF3B3-202ENST00000562722 FTOQ9C0B1 505 aaKnown RBP eCLIP15.2■□□□□ 0.02
SF3B3-202ENST00000562722 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
SF3B3-202ENST00000562722 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
SF3B3-202ENST00000562722 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
SF3B3-202ENST00000562722 ABCB11O95342 1321 aa15.19■□□□□ 0.02
SF3B3-202ENST00000562722 NFRKBQ6P4R8 1299 aa15.19■□□□□ 0.02
SF3B3-202ENST00000562722 SEPT14Q6ZU15 432 aa15.19■□□□□ 0.02
SF3B3-202ENST00000562722 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
SF3B3-202ENST00000562722 PRUNE2Q8WUY3 3088 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 A6NJR5 290 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 TNFRSF10AO00220 468 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 RFC2P35250 354 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 MRPS5P82675 430 aaKnown RBP15.18■□□□□ 0.02
SF3B3-202ENST00000562722 BFSP2Q13515 415 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 TMEM67Q5HYA8 995 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 CHST3Q7LGC8 479 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 CHD1LQ86WJ1 897 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 ADGRF4Q8IZF3 695 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 RGS22Q8NE09 1264 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 ASB2Q96Q27 587 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 ZSCAN10Q96SZ4 725 aaPredicted RBP15.18■□□□□ 0.02
SF3B3-202ENST00000562722 VAT1LQ9HCJ6 419 aa15.18■□□□□ 0.02
SF3B3-202ENST00000562722 B4E1Z4 1266 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 ARIH2O95376 493 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 NT5C2P49902 561 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 PTPN11Q06124 597 aaPredicted RBP15.17■□□□□ 0.02
SF3B3-202ENST00000562722 SKIV2LQ15477 1246 aaKnown RBP15.17■□□□□ 0.02
SF3B3-202ENST00000562722 IMMTQ16891 758 aaKnown RBP15.17■□□□□ 0.02
SF3B3-202ENST00000562722 LY6KQ17RY6 165 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 ASPRV1Q53RT3 343 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 MCF2L2Q86YR7 1114 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 PLEKHM2Q8IWE5 1019 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 CCDC155Q8N6L0 562 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 NSUN6Q8TEA1 469 aaKnown RBP15.17■□□□□ 0.02
SF3B3-202ENST00000562722 AFG1LQ8WV93 481 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 CERS4Q9HA82 394 aa15.17■□□□□ 0.02
SF3B3-202ENST00000562722 HIP1O00291 1037 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 GH1P01241 217 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 CA3P07451 260 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 PARP1P09874 1014 aaKnown RBP15.16■□□□□ 0.02
SF3B3-202ENST00000562722 IQCF3P0C7M6 154 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 AAMPQ13685 434 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 STXBP2Q15833 593 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 PTGISQ16647 500 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 QRICH1Q2TAL8 776 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 ARHGEF16Q5VV41 709 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 SMC5Q8IY18 1101 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 SYTL5Q8TDW5 730 aaPredicted RBP15.16■□□□□ 0.02
SF3B3-202ENST00000562722 ADAMTS19Q8TE59 1207 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 TBC1D5Q92609 795 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 VWCEQ96DN2 955 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 TAAR1Q96RJ0 339 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 SLC9A7Q96T83 725 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 RMDN3Q96TC7 470 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 UBAC1Q9BSL1 405 aa15.16■□□□□ 0.02
SF3B3-202ENST00000562722 MRPL11Q9Y3B7 192 aaKnown RBP15.16■□□□□ 0.02
SF3B3-202ENST00000562722 GBF1Q92538 1859 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 KIF28PB7ZC32 967 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 GTPBP6O43824 516 aaPredicted RBP15.15■□□□□ 0.02
SF3B3-202ENST00000562722 MMP3P08254 477 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 EIF2AK2P19525 551 aaKnown RBP15.15■□□□□ 0.02
SF3B3-202ENST00000562722 CASTP20810 708 aaKnown RBP15.15■□□□□ 0.02
SF3B3-202ENST00000562722 KCNJ6P48051 423 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 FBXO11Q86XK2 927 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 ENAHQ8N8S7 591 aaPredicted RBP15.15■□□□□ 0.02
SF3B3-202ENST00000562722 YTHDC1Q96MU7 727 aaKnown RBP15.15■□□□□ 0.02
SF3B3-202ENST00000562722 IWS1Q96ST2 819 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 KRT23Q9C075 422 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 CTNNA3Q9UI47 895 aa15.15■□□□□ 0.02
SF3B3-202ENST00000562722 CFBP00751 764 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 NUCB1Q02818 461 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 ARHGAP1Q07960 439 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 IFIT1BQ5T764 474 aaKnown RBP15.14■□□□□ 0.01
SF3B3-202ENST00000562722 CCDC62Q6P9F0 684 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 UHRF1Q96T88 793 aaPredicted RBP15.14■□□□□ 0.01
SF3B3-202ENST00000562722 DSCC1Q9BVC3 393 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 MAF1Q9H063 256 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 OSBPL3Q9H4L5 887 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 CNNM2Q9H8M5 875 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 ZSWIM5Q9P217 1185 aa15.14■□□□□ 0.01
SF3B3-202ENST00000562722 COL20A1Q9P218 1284 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms