RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 KCNK12Q9HB15 430 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 KLHL14Q9P2G3 628 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 NPFFR2Q9Y5X5 522 aa7.16□□□□□ -1.26
USP8-218ENST00000561330 DBHP09172 617 aa7.15□□□□□ -1.26
USP8-218ENST00000561330 CBX2Q14781 532 aaPredicted RBP7.15□□□□□ -1.26
USP8-218ENST00000561330 ZC3H12BQ5HYM0 836 aaKnown RBP7.15□□□□□ -1.26
USP8-218ENST00000561330 FAM209AQ5JX71 171 aa7.15□□□□□ -1.26
USP8-218ENST00000561330 ZNF648Q5T619 568 aaPredicted RBP7.15□□□□□ -1.26
USP8-218ENST00000561330 TMEM132EQ6IEE7 984 aa7.15□□□□□ -1.26
USP8-218ENST00000561330 DCAF4Q8WV16 495 aa7.15□□□□□ -1.26
USP8-218ENST00000561330 SLC38A3Q99624 504 aa7.15□□□□□ -1.26
USP8-218ENST00000561330 GPR27Q9NS67 375 aa7.15□□□□□ -1.26
USP8-218ENST00000561330 PCDHA2Q9Y5H9 948 aa7.15□□□□□ -1.26
USP8-218ENST00000561330 C22orf46C9J442 243 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 F8W031 263 aaPredicted RBP7.14□□□□□ -1.27
USP8-218ENST00000561330 GLI4P10075 376 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 LCP1P13796 627 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 BCL6P41182 706 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 SUMO1P63165 101 aaKnown RBP7.14□□□□□ -1.27
USP8-218ENST00000561330 SRSF3P84103 164 aaKnown RBP7.14□□□□□ -1.27
USP8-218ENST00000561330 FOXB2Q5VYV0 432 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 RSPO2Q6UXX9 243 aaPredicted RBP7.14□□□□□ -1.27
USP8-218ENST00000561330 RPTNQ6XPR3 784 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 SYDE1Q6ZW31 735 aaPredicted RBP7.14□□□□□ -1.27
USP8-218ENST00000561330 CEP68Q76N32 757 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 KRTAP1-3Q8IUG1 177 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 TEX2Q8IWB9 1127 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 LILRB2Q8N423 598 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 NETO2Q8NC67 525 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 ZSWIM2Q8NEG5 633 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 THAP3Q8WTV1 239 aaPredicted RBP7.14□□□□□ -1.27
USP8-218ENST00000561330 CHAMP1Q96JM3 812 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 DHRS4Q9BTZ2 278 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 PHF20Q9BVI0 1012 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 MCOLN1Q9GZU1 580 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 SIRT5Q9NXA8 310 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 FBLN5Q9UBX5 448 aa7.14□□□□□ -1.27
USP8-218ENST00000561330 DBR1Q9UK59 544 aaKnown RBP7.14□□□□□ -1.27
USP8-218ENST00000561330 TEX51A0A1B0GUA7 166 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 MYOCOSA0A1B0GUC4 107 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 BLACEA4D250 179 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 VIPR1P32241 457 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 MAPKAPK2P49137 400 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 LSAMPQ13449 338 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 NTRK3Q16288 839 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 WWC2Q6AWC2 1192 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 JMYQ8N9B5 988 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 PLEKHO2Q8TD55 490 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 KCNN1Q92952 543 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 TRMT2BQ96GJ1 504 aaKnown RBP7.13□□□□□ -1.27
USP8-218ENST00000561330 TMEM169Q96HH4 297 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 PPP1R16BQ96T49 567 aa7.13□□□□□ -1.27
USP8-218ENST00000561330 ZC3H12DA2A288 527 aaKnown RBP7.12□□□□□ -1.27
USP8-218ENST00000561330 NTRK1P04629 796 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 TMEM253P0C7T8 217 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 PKN1Q16512 942 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 PLEKHN1Q494U1 663 aaPredicted RBP7.12□□□□□ -1.27
USP8-218ENST00000561330 C2orf27AQ580R0 203 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 PEX11GQ96HA9 241 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 EXOC2Q96KP1 924 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 PIF1Q9H611 641 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 NUDT5Q9UKK9 219 aa7.12□□□□□ -1.27
USP8-218ENST00000561330 COA3Q9Y2R0 106 aaPredicted RBP7.12□□□□□ -1.27
USP8-218ENST00000561330 MRPS23Q9Y3D9 190 aaKnown RBP7.12□□□□□ -1.27
USP8-218ENST00000561330 H7BY64 318 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 SEMA7AO75326 666 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 FPR2P25090 351 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 PRR5P85299 388 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 MROH9Q5TGP6 573 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 STYK1Q6J9G0 422 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 ZC3H14Q6PJT7 736 aaKnown RBP7.11□□□□□ -1.27
USP8-218ENST00000561330 KCNT2Q6UVM3 1135 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 NLRP10Q86W26 655 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 ZFYVE21Q9BQ24 234 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 RXFP1Q9HBX9 757 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 CLDND1Q9NY35 253 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 FBXL7Q9UJT9 491 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 X6R8D5 127 aa7.11□□□□□ -1.27
USP8-218ENST00000561330 CCDC163A0A0D9SF12 145 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 NFIBO00712 420 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 MSCO60682 206 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 GPR85P60893 370 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 DCP2Q8IU60 420 aaKnown RBP7.1□□□□□ -1.27
USP8-218ENST00000561330 RIOX2Q8IUF8 465 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 IFNL3Q8IZI9 196 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 Q8N1Y9 231 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 BHLHE22Q8NFJ8 381 aaPredicted RBP7.1□□□□□ -1.27
USP8-218ENST00000561330 PTPRN2Q92932 1015 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 KISS1RQ969F8 398 aaPredicted RBP7.1□□□□□ -1.27
USP8-218ENST00000561330 SGPP1Q9BX95 441 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 PTCH2Q9Y6C5 1203 aa7.1□□□□□ -1.27
USP8-218ENST00000561330 ETV2O00321 342 aaPredicted RBP7.09□□□□□ -1.27
USP8-218ENST00000561330 GABREP78334 506 aa7.09□□□□□ -1.27
USP8-218ENST00000561330 DLG4P78352 724 aa7.09□□□□□ -1.27
USP8-218ENST00000561330 KIZQ2M2Z5 673 aa7.09□□□□□ -1.27
USP8-218ENST00000561330 LCE3BQ5TA77 95 aa7.09□□□□□ -1.27
USP8-218ENST00000561330 LBX2Q6XYB7 198 aa7.09□□□□□ -1.27
USP8-218ENST00000561330 MAMDC2Q7Z304 686 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms