RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 C2orf69Q8N8R5 385 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 CHST13Q8NET6 341 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 REPS2Q8NFH8 660 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 SLC10A4Q96EP9 437 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 FAM20AQ96MK3 541 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 TMEM60Q9H2L4 133 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 GBA2Q9HCG7 927 aaPredicted RBP13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 RAVER2Q9HCJ3 691 aaKnown RBP13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 FBXO40Q9UH90 709 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 SLC45A1Q9Y2W3 748 aa13.38□□□□□ -0.27
AC087878.1-201ENST00000560709 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 TDP2O95551 362 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 SLFN14P0C7P3 912 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 ALAS1P13196 640 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 UBA7P41226 1012 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 GRIN1Q05586 938 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 TYRO3Q06418 890 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 SEMA3FQ13275 785 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 STX1AQ16623 288 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 CPXCR1Q8N123 301 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 IGSF22Q8N9C0 903 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 CLEC4DQ8WXI8 215 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 ACAD9Q9H845 621 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 ANO10Q9NW15 660 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 ZNF214Q9UL59 606 aaPredicted RBP13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 FRMPD4Q14CM0 1322 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 KDM3AQ9Y4C1 1321 aa13.37□□□□□ -0.27
AC087878.1-201ENST00000560709 SLC37A4O43826 429 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 SMC2O95347 1197 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 ZNF76P36508 570 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 SNRNP48Q6IEG0 339 aaKnown RBP13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 NIPA1Q7RTP0 329 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 CKAP2LQ8IYA6 745 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 KCTD17Q8N5Z5 321 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 TRIML1Q8N9V2 468 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 CALML4Q96GE6 196 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 TRERF1Q96PN7 1200 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 RBSNQ9H1K0 784 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 KCNMB3Q9NPA1 279 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 DISC1Q9NRI5 854 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 RNF146Q9NTX7 359 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 MRVI1Q9Y6F6 885 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 RPTORQ8N122 1335 aa13.36□□□□□ -0.27
AC087878.1-201ENST00000560709 PARP14Q460N5 1801 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 ACTN4O43707 911 aaKnown RBP13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 ZBTB48P10074 688 aaPredicted RBP13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 BCRP11274 1271 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 CETPP11597 493 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 HOXA13P31271 388 aaPredicted RBP13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 STAT3P40763 770 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 GTF2A2P52657 109 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 DGKZQ13574 1117 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 POSTNQ15063 836 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 IL17AQ16552 155 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 LONRF3Q496Y0 759 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 KRT79Q5XKE5 535 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 RNF207Q6ZRF8 634 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 RASSF8Q8NHQ8 419 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 ERMNQ8TAM6 284 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 FAM200AQ8TCP9 573 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 DHX58Q96C10 678 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 EPSTI1Q96J88 318 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 GTPBP4Q9BZE4 634 aaKnown RBP13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 TTC12Q9H892 705 aaPredicted RBP13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 ZNF408Q9H9D4 720 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 STK17AQ9UEE5 414 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
AC087878.1-201ENST00000560709 NFIBO00712 420 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 EDIL3O43854 480 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 CELF2O95319 508 aaKnown RBP13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 SLC25A27O95847 323 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 POTEIP0CG38 1075 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 STAT6P42226 847 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 TECP42680 631 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 TXKP42681 527 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 TMEM132BQ14DG7 1078 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 CEP55Q53EZ4 464 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 SPECC1Q5M775 1068 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 NT5DC1Q5TFE4 455 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 RRAGBQ5VZM2 374 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 DLK2Q6UY11 383 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 CABP7Q86V35 215 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 RIOX2Q8IUF8 465 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 SYTL5Q8TDW5 730 aaPredicted RBP13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 LRRC27Q9C0I9 530 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
AC087878.1-201ENST00000560709 LRWD1Q9UFC0 647 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms