RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 TXNP10599 105 aaKnown RBP20.36■□□□□ 0.85
CRTC3-208ENST00000560098 CDC37Q16543 378 aaPredicted RBP20.36■□□□□ 0.85
CRTC3-208ENST00000560098 NBPF20Q3BBV1 942 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 FAM47CQ5HY64 1035 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 SYMPKQ92797 1274 aaKnown RBP20.36■□□□□ 0.85
CRTC3-208ENST00000560098 COPS5Q92905 334 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 VWCEQ96DN2 955 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 ZSCAN10Q96SZ4 725 aaPredicted RBP20.36■□□□□ 0.85
CRTC3-208ENST00000560098 MAF1Q9H063 256 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 NKX2-4Q9H2Z4 354 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 SLC28A3Q9HAS3 691 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 YBX2Q9Y2T7 364 aaKnown RBP20.36■□□□□ 0.85
CRTC3-208ENST00000560098 SLC4A7Q9Y6M7 1214 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 B4E1Z4 1266 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 PFKMP08237 780 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 TTLL4Q14679 1199 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 NFRKBQ6P4R8 1299 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 DSCC1Q9BVC3 393 aa20.36■□□□□ 0.85
CRTC3-208ENST00000560098 ABCB11O95342 1321 aa20.35■□□□□ 0.85
CRTC3-208ENST00000560098 IMMTQ16891 758 aaKnown RBP20.35■□□□□ 0.85
CRTC3-208ENST00000560098 ASPRV1Q53RT3 343 aa20.35■□□□□ 0.85
CRTC3-208ENST00000560098 ADGRF4Q8IZF3 695 aa20.35■□□□□ 0.85
CRTC3-208ENST00000560098 ENAHQ8N8S7 591 aaPredicted RBP20.35■□□□□ 0.85
CRTC3-208ENST00000560098 ZSWIM5Q9P217 1185 aa20.35■□□□□ 0.85
CRTC3-208ENST00000560098 ZBBXA8MT70 800 aa20.34■□□□□ 0.85
CRTC3-208ENST00000560098 ARIH2O95376 493 aa20.34■□□□□ 0.85
CRTC3-208ENST00000560098 RABGGTBP53611 331 aa20.34■□□□□ 0.85
CRTC3-208ENST00000560098 PTPN11Q06124 597 aaPredicted RBP20.34■□□□□ 0.85
CRTC3-208ENST00000560098 ADGRE1Q14246 886 aa20.34■□□□□ 0.85
CRTC3-208ENST00000560098 SYTL5Q8TDW5 730 aaPredicted RBP20.34■□□□□ 0.85
CRTC3-208ENST00000560098 PPM1EQ8WY54 764 aa20.34■□□□□ 0.85
CRTC3-208ENST00000560098 TBC1D5Q92609 795 aa20.34■□□□□ 0.85
CRTC3-208ENST00000560098 LAMA4Q16363 1823 aa20.33■□□□□ 0.85
CRTC3-208ENST00000560098 TJAP1Q5JTD0 557 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 CCDC62Q6P9F0 684 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 DEFB128Q7Z7B8 93 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 MCF2L2Q86YR7 1114 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 NSUN6Q8TEA1 469 aaKnown RBP20.33■□□□□ 0.84
CRTC3-208ENST00000560098 PPP1R13LQ8WUF5 828 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 KRT23Q9C075 422 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 CTNNA3Q9UI47 895 aa20.33■□□□□ 0.84
CRTC3-208ENST00000560098 PITPNM1O00562 1244 aa20.32■□□□□ 0.84
CRTC3-208ENST00000560098 PARP1P09874 1014 aaKnown RBP20.32■□□□□ 0.84
CRTC3-208ENST00000560098 ATP2A2P16615 1042 aaKnown RBP20.32■□□□□ 0.84
CRTC3-208ENST00000560098 RFC2P35250 354 aa20.32■□□□□ 0.84
CRTC3-208ENST00000560098 QRICH1Q2TAL8 776 aa20.32■□□□□ 0.84
CRTC3-208ENST00000560098 PRDM6Q9NQX0 595 aa20.32■□□□□ 0.84
CRTC3-208ENST00000560098 COL20A1Q9P218 1284 aa20.32■□□□□ 0.84
CRTC3-208ENST00000560098 CHD7Q9P2D1 2997 aa20.32■□□□□ 0.84
CRTC3-208ENST00000560098 MRPL11Q9Y3B7 192 aaKnown RBP20.32■□□□□ 0.84
CRTC3-208ENST00000560098 PCDHA11Q9Y5I1 949 aa20.32■□□□□ 0.84
CRTC3-208ENST00000560098 SCN10AQ9Y5Y9 1956 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 DHX16O60231 1041 aaKnown RBP20.31■□□□□ 0.84
CRTC3-208ENST00000560098 IGFBP4P22692 258 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 PPP2R2DQ66LE6 453 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 SEPT14Q6ZU15 432 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 FBXO11Q86XK2 927 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 RETREG2Q8NC44 543 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 EXOC6Q8TAG9 804 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 YTHDC1Q96MU7 727 aaKnown RBP20.31■□□□□ 0.84
CRTC3-208ENST00000560098 IWS1Q96ST2 819 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 RMDN3Q96TC7 470 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 UBAC1Q9BSL1 405 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 CNNM2Q9H8M5 875 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 JMJD4Q9H9V9 463 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 VAT1LQ9HCJ6 419 aa20.31■□□□□ 0.84
CRTC3-208ENST00000560098 GH1P01241 217 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 IQCF3P0C7M6 154 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 ACTN1P12814 892 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 MYOGP15173 224 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 STXBP2Q15833 593 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 LY6KQ17RY6 165 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 AFG1LQ8WV93 481 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 NOD1Q9Y239 953 aa20.3■□□□□ 0.84
CRTC3-208ENST00000560098 MMP3P08254 477 aa20.29■□□□□ 0.84
CRTC3-208ENST00000560098 CHMP4BP1P59074 171 aa20.29■□□□□ 0.84
CRTC3-208ENST00000560098 ARHGAP1Q07960 439 aa20.29■□□□□ 0.84
CRTC3-208ENST00000560098 BFSP2Q13515 415 aa20.29■□□□□ 0.84
CRTC3-208ENST00000560098 ARHGEF16Q5VV41 709 aa20.29■□□□□ 0.84
CRTC3-208ENST00000560098 ATXN2LQ8WWM7 1075 aaKnown RBP20.29■□□□□ 0.84
CRTC3-208ENST00000560098 GBF1Q92538 1859 aa20.28■□□□□ 0.84
CRTC3-208ENST00000560098 CCDC85BQ15834 202 aaPredicted RBP20.28■□□□□ 0.84
CRTC3-208ENST00000560098 IFIT1BQ5T764 474 aaKnown RBP20.28■□□□□ 0.84
CRTC3-208ENST00000560098 THEGQ9P2T0 379 aa20.28■□□□□ 0.84
CRTC3-208ENST00000560098 EIF2AK2P19525 551 aaKnown RBP20.27■□□□□ 0.84
CRTC3-208ENST00000560098 CASTP20810 708 aaKnown RBP20.27■□□□□ 0.84
CRTC3-208ENST00000560098 PTGISQ16647 500 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 TMEM67Q5HYA8 995 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 CHST3Q7LGC8 479 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 SESTD1Q86VW0 696 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 STAG2Q8N3U4 1231 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 SLC9A7Q96T83 725 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 AMNQ9BXJ7 453 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 FTOQ9C0B1 505 aaKnown RBP eCLIP20.27■□□□□ 0.84
CRTC3-208ENST00000560098 DDX41Q9UJV9 622 aaKnown RBP20.27■□□□□ 0.84
CRTC3-208ENST00000560098 MUC3AQ02505 3323 aa20.27■□□□□ 0.84
CRTC3-208ENST00000560098 EIF3JO75822 258 aaKnown RBP20.27■□□□□ 0.83
CRTC3-208ENST00000560098 CFBP00751 764 aa20.27■□□□□ 0.83
CRTC3-208ENST00000560098 PHOSPHO2Q8TCD6 241 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms