RNA–Protein interactions for RNA: ENST00000559942.5

PPP1R3E-204, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 1 (best)

Gene PPP1R3E, Length 1,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-204ENST00000559942 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
PPP1R3E-204ENST00000559942 PARP14Q460N5 1801 aa11.42□□□□□ -0.58
PPP1R3E-204ENST00000559942 FOCADQ5VW36 1801 aa11.42□□□□□ -0.58
PPP1R3E-204ENST00000559942 SCN10AQ9Y5Y9 1956 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 FLT1P17948 1338 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 IL16Q14005 1332 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 ZNF462Q96JM2 2506 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 SP9P0CG40 484 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 CERKLQ49MI3 558 aaPredicted RBP11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 LRRC8DQ7L1W4 858 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 CCDC144CPQ8IYA2 1237 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 USP44Q9H0E7 712 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 Q9Y3F1 56 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 NR2E1Q9Y466 385 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 MYH1P12882 1939 aa11.41□□□□□ -0.58
PPP1R3E-204ENST00000559942 PDS5AQ29RF7 1337 aaKnown RBP11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 SMG1Q96Q15 3661 aaKnown RBP11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 A0A1W2PRG0 241 aa11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 SRRM3A6NNA2 597 aaPredicted RBP11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 CIAO1O76071 339 aa11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 DDX10Q13206 875 aaKnown RBP11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 N4BP2L1Q5TBK1 243 aaPredicted RBP11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 NFRKBQ6P4R8 1299 aa11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 NETO1Q8TDF5 533 aa11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 XAGE2Q96GT9 111 aa11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 HMG20BQ9P0W2 317 aa11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 ADAMTS5Q9UNA0 930 aa11.4□□□□□ -0.58
PPP1R3E-204ENST00000559942 ZBTB22O15209 634 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 GLP2RO95838 553 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 MMP1P03956 469 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 BMPR1AP36894 532 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 NRIP1P48552 1158 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 PURAQ00577 322 aaKnown RBP11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 KIAA1755Q5JYT7 1200 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 ADGRD2Q7Z7M1 963 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 SPATA5Q8NB90 893 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 PPP1R13LQ8WUF5 828 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 HNRNPABQ99729 332 aaKnown RBP11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 GPHNQ9NQX3 736 aaPredicted RBP11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 LRP2BPQ9P2M1 347 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 COL4A3Q01955 1670 aa11.39□□□□□ -0.59
PPP1R3E-204ENST00000559942 UPP2O95045 317 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 BAG3O95817 575 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 MYL3P08590 195 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 TGM1P22735 817 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 GUCY1A2P33402 732 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 IL15P40933 162 aaPredicted RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 PTPN11Q06124 597 aaPredicted RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 RBM23Q86U06 439 aaKnown RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 DDX1Q92499 740 aaKnown RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 FGD4Q96M96 766 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 NEUROD6Q96NK8 337 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 MTG1Q9BT17 334 aaPredicted RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 ZNF214Q9UL59 606 aaPredicted RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 RWDD3Q9Y3V2 267 aa11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 DSPP15924 2871 aaKnown RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 MYO5AQ9Y4I1 1855 aaKnown RBP11.38□□□□□ -0.59
PPP1R3E-204ENST00000559942 STK25O00506 426 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 VWA5AO00534 786 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 ASGR2P07307 311 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 CAMK1Q14012 370 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 MVPQ14764 893 aaKnown RBP11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 SEPT2Q15019 361 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 PTGISQ16647 500 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 IQSEC1Q6DN90 963 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 NAA16Q6N069 864 aaPredicted RBP11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 ADGRA1Q86SQ6 560 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 SPICE1Q8N0Z3 855 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 FIBCD1Q8N539 461 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 FBXO3Q9UK99 471 aa11.37□□□□□ -0.59
PPP1R3E-204ENST00000559942 PLCG2P16885 1265 aa11.36□□□□□ -0.59
PPP1R3E-204ENST00000559942 RBM25P49756 843 aaKnown RBP11.36□□□□□ -0.59
PPP1R3E-204ENST00000559942 DYNLL1P63167 89 aaKnown RBP11.36□□□□□ -0.59
PPP1R3E-204ENST00000559942 GORABQ5T7V8 394 aa11.36□□□□□ -0.59
PPP1R3E-204ENST00000559942 SERPINB13Q9UIV8 391 aa11.36□□□□□ -0.59
PPP1R3E-204ENST00000559942 NBEAQ8NFP9 2946 aa11.36□□□□□ -0.59
PPP1R3E-204ENST00000559942 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 TMEM8BA6NDV4 472 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 C2CD4DB7Z1M9 353 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 E9PSI1 815 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 SPTLC1O15269 473 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 LGR5O75473 907 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 TFCP2Q12800 502 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 ANKRD35Q8N283 1001 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 NEK1Q96PY6 1258 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 ERVK-5Q9HDB9 667 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 PDGFCQ9NRA1 345 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 SNRKQ9NRH2 765 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 FBXL21Q9UKT6 434 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 RALGAPA1Q6GYQ0 2036 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 ADAMTS20P59510 1910 aa11.35□□□□□ -0.59
PPP1R3E-204ENST00000559942 EIF4E1BA6NMX2 242 aaKnown RBP11.34□□□□□ -0.59
PPP1R3E-204ENST00000559942 RBAK-RBAKDNI3L0D1 243 aa11.34□□□□□ -0.59
PPP1R3E-204ENST00000559942 MPHOSPH10O00566 681 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms