RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 SMCHD1A6NHR9 2005 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 GBF1Q92538 1859 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 CYP2D7A0A087X1C5 515 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 TSPY3P0CV98 308 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 TSPY8P0CW00 308 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 KIF5BP33176 963 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 USP14P54578 494 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 NHLH1Q02575 133 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 TRIM29Q14134 588 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 GSE1Q14687 1217 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 BRAPQ7Z569 592 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 FAM177A1Q8N128 213 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 FANCBQ8NB91 859 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 DDX11Q96FC9 970 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 MAML3Q96JK9 1138 aa16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 RNF26Q9BY78 433 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 MTIF3Q9H2K0 278 aaKnown RBP16.4■□□□□ 0.22
TRAPPC6B-206ENST00000556765 DEXIO95424 95 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 GH2P01242 217 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 XBP1P17861 261 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 GNAQP50148 359 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ACLYP53396 1101 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 NTRK3Q16288 839 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 FBXO18Q8NFZ0 1043 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CTCFLQ8NI51 663 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 NUP133Q8WUM0 1156 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ZNF396Q96N95 335 aaPredicted RBP16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 TSEN34Q9BSV6 310 aaKnown RBP16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 INCENPQ9NQS7 918 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 NRBP1Q9UHY1 535 aa16.39■□□□□ 0.21
TRAPPC6B-206ENST00000556765 GTPBP6O43824 516 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 PRPF40AO75400 957 aaKnown RBP16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CYP2D6P10635 497 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 FDPSP14324 419 aaKnown RBP16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ERCC3P19447 782 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CDK8P49336 464 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 UBE2HP62256 183 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 TFAP4Q01664 338 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 AKAP17AQ02040 695 aaKnown RBP16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 RESTQ13127 1097 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 FOXD4L5Q5VV16 416 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SHCBP1Q8NEM2 672 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 FOXD4L4Q8WXT5 416 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SPATC1LQ9H0A9 340 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 KIAA1683Q9H0B3 1180 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 RPAP3Q9H6T3 665 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 KAT14Q9H8E8 782 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 IL23AQ9NPF7 189 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 MTCH2Q9Y6C9 303 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 USP34Q70CQ2 3546 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 MROH7Q68CQ1 1323 aa16.38■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ADAMTS4O75173 837 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 PRDM1O75626 825 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 RASA1P20936 1047 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CDC27P30260 824 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 RABGGTBP53611 331 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 GABPAQ06546 454 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 TROAPQ12815 778 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 LENG1Q96BZ8 264 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ALG1Q9BT22 464 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 PPP1R12CQ9BZL4 782 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SERPINB13Q9UIV8 391 aa16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 GREB1LQ9C091 1923 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CFAP54Q96N23 3096 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 MOXD2PA6NHM9 499 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 POU3F3P20264 500 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 PLCD1P51178 756 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ABRAQ8N0Z2 381 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 STK11IPQ8N1F8 1099 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 HLA-CQ95604 372 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 UIMC1Q96RL1 719 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CD320Q9NPF0 282 aa16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
TRAPPC6B-206ENST00000556765 BRWD1Q9NSI6 2320 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 FGBP02675 491 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 AKR1A1P14550 325 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 MYOGP15173 224 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 TAL1P17542 331 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 NOVP48745 357 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SAFBQ15424 915 aaKnown RBP eCLIP16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 ACER1Q8TDN7 264 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 MROH8Q9H579 483 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SENP2Q9HC62 589 aa16.35■□□□□ 0.21
TRAPPC6B-206ENST00000556765 RFXAPO00287 272 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SMARCA1P28370 1054 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 CDK7P50613 346 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 DNM1Q05193 864 aaKnown RBP16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 OTOP2Q7RTS6 562 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 NCAPG2Q86XI2 1143 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 DYNLL2Q96FJ2 89 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 FBXL18Q96ME1 805 aa16.34■□□□□ 0.21
TRAPPC6B-206ENST00000556765 SLC26A6Q9BXS9 759 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms