RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 KIF23Q02241 960 aaPredicted RBP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 RCSD1Q6JBY9 416 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 EEF2KMTQ96G04 330 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 FTOQ9C0B1 505 aaKnown RBP eCLIP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 ZBTB5O15062 677 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 IFNAR1P17181 557 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 NACC1Q96RE7 527 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 JPH2Q9BR39 696 aaPredicted RBP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 PCIF1Q9H4Z3 704 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 RPAP3Q9H6T3 665 aaPredicted RBP19.1■□□□□ 0.65
PTPN21-208ENST00000556564 TXNDC16Q9P2K2 825 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 RHOXF2BP0C7M4 288 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 LIFRP42702 1097 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 RMDN3Q96TC7 470 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 RHOXF2Q9BQY4 288 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 FAM204AQ9H8W3 233 aa19.1■□□□□ 0.65
PTPN21-208ENST00000556564 GMPSP49915 693 aaPredicted RBP19.09■□□□□ 0.65
PTPN21-208ENST00000556564 OSTNP61366 133 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 UBL4BQ8N7F7 174 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 PPLO60437 1756 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 SRGAP2CP0DJJ0 459 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 U2AF1L4Q8WU68 220 aaKnown RBP19.09■□□□□ 0.65
PTPN21-208ENST00000556564 FAM49AQ9H0Q0 323 aaPredicted RBP19.09■□□□□ 0.65
PTPN21-208ENST00000556564 TTLL3Q9Y4R7 772 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 PPP1R21Q6ZMI0 780 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 NUB1Q9Y5A7 615 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 MTMR2Q13614 643 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 IPO4Q8TEX9 1081 aaKnown RBP19.09■□□□□ 0.65
PTPN21-208ENST00000556564 DAGLAQ9Y4D2 1042 aa19.09■□□□□ 0.65
PTPN21-208ENST00000556564 HMGCS2P54868 508 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 SREK1Q8WXA9 508 aaKnown RBP19.08■□□□□ 0.65
PTPN21-208ENST00000556564 MEGF6O75095 1541 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 CCDC66A2RUB6 948 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 STXBP2Q15833 593 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 CCDC77Q9BR77 488 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 GABPAQ06546 454 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 TMTC3Q6ZXV5 915 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 PPM1KQ8N3J5 372 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 GGA3Q9NZ52 723 aa19.08■□□□□ 0.65
PTPN21-208ENST00000556564 ENAHQ8N8S7 591 aaPredicted RBP19.08■□□□□ 0.64
PTPN21-208ENST00000556564 RNF146Q9NTX7 359 aa19.08■□□□□ 0.64
PTPN21-208ENST00000556564 GSG1L2A8MUP6 293 aa19.08■□□□□ 0.64
PTPN21-208ENST00000556564 AKR1B1P15121 316 aa19.08■□□□□ 0.64
PTPN21-208ENST00000556564 ZNF157P51786 506 aaPredicted RBP19.08■□□□□ 0.64
PTPN21-208ENST00000556564 TNNC1P63316 161 aa19.08■□□□□ 0.64
PTPN21-208ENST00000556564 NSUN4Q96CB9 384 aaKnown RBP19.08■□□□□ 0.64
PTPN21-208ENST00000556564 PCDHB6Q9Y5E3 794 aa19.08■□□□□ 0.64
PTPN21-208ENST00000556564 PPP6R2O75170 966 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 FERP16591 822 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 MTMR1Q13613 665 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 GBP6Q6ZN66 633 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 GRAMD1CQ8IYS0 662 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.07■□□□□ 0.64
PTPN21-208ENST00000556564 CAPN9O14815 690 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 CD2BP2O95400 341 aaKnown RBP19.07■□□□□ 0.64
PTPN21-208ENST00000556564 IQGAP1P46940 1657 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 MCM6Q14566 821 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 AK8Q96MA6 479 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 NLRP4Q96MN2 994 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 CLIC2O15247 247 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 SLC39A14Q15043 492 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 SCYL2Q6P3W7 929 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.07■□□□□ 0.64
PTPN21-208ENST00000556564 CCDC84Q86UT8 332 aaPredicted RBP19.07■□□□□ 0.64
PTPN21-208ENST00000556564 ANKRD36BP1Q96IX9 119 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 ACCSQ96QU6 501 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 ZNF70Q9UC06 446 aaPredicted RBP19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L15C9J2P7 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L13C9JLJ4 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L11C9JVI0 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L18D6R9N7 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L22D6RA61 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L17D6RBQ6 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L19D6RCP7 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L20D6RJB6 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 N4BP1O75113 896 aaKnown RBP19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L24Q0WX57 530 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 USP17L6PQ6QN14 398 aa19.07■□□□□ 0.64
PTPN21-208ENST00000556564 SECISBP2LQ93073 1101 aaKnown RBP19.07■□□□□ 0.64
PTPN21-208ENST00000556564 F5H6K3 240 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 STAMBPO95630 424 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 KLRC3Q07444 240 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 ABCB4P21439 1286 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 MAGEA1P43355 309 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 ARPP19P56211 112 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 RABL6Q3YEC7 729 aaPredicted RBP19.06■□□□□ 0.64
PTPN21-208ENST00000556564 CCDC14Q49A88 953 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 ADGRF4Q8IZF3 695 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
PTPN21-208ENST00000556564 ERCC5P28715 1186 aaPredicted RBP19.06■□□□□ 0.64
PTPN21-208ENST00000556564 ADKP55263 362 aaKnown RBP19.06■□□□□ 0.64
PTPN21-208ENST00000556564 MYL7Q01449 175 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 FAM107BQ9H098 131 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 FBXO40Q9UH90 709 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 STK10O94804 968 aaKnown RBP19.06■□□□□ 0.64
PTPN21-208ENST00000556564 SUGT1Q9Y2Z0 365 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 ATP2A2P16615 1042 aaKnown RBP19.06■□□□□ 0.64
PTPN21-208ENST00000556564 CALCOCO2Q13137 446 aa19.06■□□□□ 0.64
PTPN21-208ENST00000556564 SMYD4Q8IYR2 804 aaPredicted RBP19.06■□□□□ 0.64
PTPN21-208ENST00000556564 DISC1Q9NRI5 854 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms