RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HTR3BO95264 441 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 JUNBP17275 347 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-203ENST00000554636 ITGB5P18084 799 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 PPP2R1AP30153 589 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 ETV3P41162 512 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 YARSP54577 528 aaKnown RBP5.56□□□□□ -1.52
VTI1B-203ENST00000554636 CNGB1Q14028 1251 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-203ENST00000554636 MPP2Q14168 576 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 MRPL58Q14197 206 aaKnown RBP5.56□□□□□ -1.52
VTI1B-203ENST00000554636 MTHFSDQ2M296 383 aaKnown RBP5.56□□□□□ -1.52
VTI1B-203ENST00000554636 C1orf141Q5JVX7 400 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 FBXL19Q6PCT2 694 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 SLC23A3Q6PIS1 610 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 HS2ST1Q7LGA3 356 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 ERMP1Q7Z2K6 904 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 REC114Q7Z4M0 266 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 HOMEZQ8IX15 550 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 PHACTR4Q8IZ21 702 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 CYB5D2Q8WUJ1 264 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 UBE2FQ969M7 185 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 SEMA3GQ9NS98 782 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 TFCP2L1Q9NZI6 479 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 ST14Q9Y5Y6 855 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 KCPQ6ZWJ8 1503 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 SIPA1L3O60292 1781 aaPredicted RBP5.56□□□□□ -1.52
VTI1B-203ENST00000554636 UBR2Q8IWV8 1755 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 C4AP0C0L4 1744 aa5.56□□□□□ -1.52
VTI1B-203ENST00000554636 CHURC1-FNTBB4DL54 471 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 BIN1O00499 593 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 RNMTO43148 476 aaKnown RBP5.55□□□□□ -1.52
VTI1B-203ENST00000554636 DNAJA2O60884 412 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 ZNF16P17020 682 aaPredicted RBP5.55□□□□□ -1.52
VTI1B-203ENST00000554636 GARTP22102 1010 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 EIF4A3P38919 411 aaKnown RBP5.55□□□□□ -1.52
VTI1B-203ENST00000554636 SMIM5Q71RC9 77 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 TMEM87AQ8NBN3 555 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 DNAJB8Q8NHS0 232 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 ASIC4Q96FT7 647 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 Q96M66 194 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 SYT17Q9BSW7 474 aa5.55□□□□□ -1.52
VTI1B-203ENST00000554636 SUPT16HQ9Y5B9 1047 aaKnown RBP5.55□□□□□ -1.52
VTI1B-203ENST00000554636 UTRNP46939 3433 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 U2SURPO15042 1029 aaKnown RBP5.54□□□□□ -1.52
VTI1B-203ENST00000554636 TXKP42681 527 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 KIR3DL1P43629 444 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 CRKP46108 304 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 CWF19L2Q2TBE0 894 aaKnown RBP5.54□□□□□ -1.52
VTI1B-203ENST00000554636 C22orf34Q6ZV56 151 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 FLAD1Q8NFF5 587 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 BAHD1Q8TBE0 780 aaPredicted RBP5.54□□□□□ -1.52
VTI1B-203ENST00000554636 PPP1R13LQ8WUF5 828 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 FAM168AQ92567 244 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 FMNL2Q96PY5 1086 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 KIF2CQ99661 725 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 SLC52A2Q9HAB3 445 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 BRMS1Q9HCU9 246 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 UBP1Q9NZI7 540 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 CEP131Q9UPN4 1083 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 PCDHB14Q9Y5E9 798 aa5.54□□□□□ -1.52
VTI1B-203ENST00000554636 LRRN2O75325 713 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 HMGB2P26583 209 aaKnown RBP5.53□□□□□ -1.52
VTI1B-203ENST00000554636 POLD1P28340 1107 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 PRKAR2BP31323 418 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 MCM4P33991 863 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 CHMP4BP1P59074 171 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 SEZ6Q53EL9 994 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 TMEM201Q5SNT2 666 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 OGFOD2Q6N063 350 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 ATG4DQ86TL0 474 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-203ENST00000554636 NLGN2Q8NFZ4 835 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 ZNF296Q8WUU4 475 aaPredicted RBP5.53□□□□□ -1.52
VTI1B-203ENST00000554636 CFAP53Q96M91 514 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 SLAMF8Q9P0V8 285 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 ADAMTS1Q9UHI8 967 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 KIAA1551Q9HCM1 1747 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 CEMIPQ8WUJ3 1361 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 KIF13BQ9NQT8 1826 aa5.53□□□□□ -1.52
VTI1B-203ENST00000554636 CHD4Q14839 1912 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 GBP1P32455 592 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 CRKLP46109 303 aaKnown RBP5.52□□□□□ -1.53
VTI1B-203ENST00000554636 SLC39A6Q13433 755 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 CREG2Q8IUH2 290 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 IL17REQ8NFR9 667 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 COX4I2Q96KJ9 171 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 PHACTR3Q96KR7 559 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 CCDC74BQ96LY2 380 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 CTNND2Q9UQB3 1225 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.52□□□□□ -1.53
VTI1B-203ENST00000554636 DLG5Q8TDM6 1919 aa5.52□□□□□ -1.53
VTI1B-203ENST00000554636 GOLGB1Q14789 3259 aaKnown RBP5.52□□□□□ -1.53
VTI1B-203ENST00000554636 C10orf71Q711Q0 1435 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 RPS6KA4O75676 772 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 U2AF1L5P0DN76 240 aaPredicted RBP5.51□□□□□ -1.53
VTI1B-203ENST00000554636 RAG1P15918 1043 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 TPP2P29144 1249 aaPredicted RBP5.51□□□□□ -1.53
VTI1B-203ENST00000554636 POLR2BP30876 1174 aaKnown RBP5.51□□□□□ -1.53
VTI1B-203ENST00000554636 U2AF1Q01081 240 aaKnown RBP eCLIP5.51□□□□□ -1.53
VTI1B-203ENST00000554636 APOBRQ0VD83 1088 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 ARSHQ5FYA8 562 aa5.51□□□□□ -1.53
VTI1B-203ENST00000554636 FYB2Q5VWT5 728 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms