RNA–Protein interactions for RNA: ENST00000552375.1

DDX54-210, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-210ENST00000552375 IGDCC4Q8TDY8 1250 aa16.27■□□□□ 0.2
DDX54-210ENST00000552375 SCFD2Q8WU76 684 aa16.27■□□□□ 0.2
DDX54-210ENST00000552375 NEK1Q96PY6 1258 aa16.27■□□□□ 0.2
DDX54-210ENST00000552375 AMNQ9BXJ7 453 aa16.27■□□□□ 0.2
DDX54-210ENST00000552375 ZBTB5O15062 677 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 NKRFO15226 690 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDX54-210ENST00000552375 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
DDX54-210ENST00000552375 REC8O95072 547 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 CPT1AP50416 773 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 GHRHRQ02643 423 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 FPGSQ05932 587 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 TROAPQ12815 778 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 SHHQ15465 462 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 SLC35G1Q2M3R5 365 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 CATIPQ7Z7H3 387 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 ZNF654Q8IZM8 581 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 OR6J1Q8NGC5 347 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 JAKMIP1Q96N16 626 aaKnown RBP16.26■□□□□ 0.19
DDX54-210ENST00000552375 SEZ6LQ9BYH1 1024 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 COL20A1Q9P218 1284 aa16.26■□□□□ 0.19
DDX54-210ENST00000552375 CCDC69A6NI79 296 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 OPLAHO14841 1288 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 PPP1R11O60927 126 aaPredicted RBP16.25■□□□□ 0.19
DDX54-210ENST00000552375 TIMP1P01033 207 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 EPHB4P54760 987 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 HOMER1Q86YM7 354 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 DEFB123Q8N688 67 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 NSUN6Q8TEA1 469 aaKnown RBP16.25■□□□□ 0.19
DDX54-210ENST00000552375 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 TBC1D5Q92609 795 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 MTA3Q9BTC8 594 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 SNX14Q9Y5W7 946 aa16.25■□□□□ 0.19
DDX54-210ENST00000552375 GRIN2DO15399 1336 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 DDAH1O94760 285 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 CD4P01730 458 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 HSPA4P34932 840 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 HSD17B4P51659 736 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 PURAQ00577 322 aaKnown RBP16.24■□□□□ 0.19
DDX54-210ENST00000552375 ITGA7Q13683 1181 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 TTLL4Q14679 1199 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 Q7L0L9 218 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 TMEM87BQ96K49 555 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 RNPC3Q96LT9 517 aaKnown RBP16.24■□□□□ 0.19
DDX54-210ENST00000552375 TAAR1Q96RJ0 339 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 IWS1Q96ST2 819 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 RMDN3Q96TC7 470 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 RIOX1Q9H6W3 641 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 POLR3EQ9NVU0 708 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 PCDHA1Q9Y5I3 950 aa16.24■□□□□ 0.19
DDX54-210ENST00000552375 KIAA1217Q5T5P2 1943 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 COL6A3P12111 3177 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 CYTH3O43739 400 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 ARIH2O95376 493 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 CFBP00751 764 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 PSMC6P62333 389 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 TRAF1Q13077 416 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 BRDTQ58F21 947 aaPredicted RBP16.23■□□□□ 0.19
DDX54-210ENST00000552375 MFSD5Q6N075 450 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 PIGSQ96S52 555 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 NAP1L2Q9ULW6 460 aaPredicted RBP16.23■□□□□ 0.19
DDX54-210ENST00000552375 CDH23Q9H251 3354 aa16.23■□□□□ 0.19
DDX54-210ENST00000552375 PLEKHA8P1O95397 391 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 TXNP10599 105 aaKnown RBP16.22■□□□□ 0.19
DDX54-210ENST00000552375 EIF2AK2P19525 551 aaKnown RBP16.22■□□□□ 0.19
DDX54-210ENST00000552375 PPIGQ13427 754 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■□□□□ 10.6
DDX54-210ENST00000552375 KRT32Q14532 448 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 ARHGEF16Q5VV41 709 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 FAM109BQ6ICB4 259 aaPredicted RBP16.22■□□□□ 0.19
DDX54-210ENST00000552375 CCDC62Q6P9F0 684 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 COPS5Q92905 334 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 MAP3K14Q99558 947 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 PPP1R12CQ9BZL4 782 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 PXMP2Q9NR77 195 aa16.22■□□□□ 0.19
DDX54-210ENST00000552375 MAP3K20Q9NYL2 800 aaKnown RBP16.22■□□□□ 0.19
DDX54-210ENST00000552375 A6NJR5 290 aa16.21■□□□□ 0.19
DDX54-210ENST00000552375 MYL3P08590 195 aa16.21■□□□□ 0.19
DDX54-210ENST00000552375 SMAD3P84022 425 aaKnown RBP16.21■□□□□ 0.19
DDX54-210ENST00000552375 FGD1P98174 961 aa16.21■□□□□ 0.19
DDX54-210ENST00000552375 STXBP2Q15833 593 aa16.21■□□□□ 0.19
DDX54-210ENST00000552375 CMTR1Q8N1G2 835 aaKnown RBP16.21■□□□□ 0.19
DDX54-210ENST00000552375 SAMD3Q8N6K7 520 aa16.21■□□□□ 0.19
DDX54-210ENST00000552375 CTCFLQ8NI51 663 aaPredicted RBP16.21■□□□□ 0.19
DDX54-210ENST00000552375 MTG1Q9BT17 334 aaPredicted RBP16.21■□□□□ 0.19
DDX54-210ENST00000552375 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
DDX54-210ENST00000552375 HIPK3Q9H422 1215 aa16.21■□□□□ 0.19
DDX54-210ENST00000552375 MTMR10Q9NXD2 777 aa16.21■□□□□ 0.19
DDX54-210ENST00000552375 PNMA6FA0A0J9YX94 578 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 B4GALT4O60513 344 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 NR3C2P08235 984 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 CASTP20810 708 aaKnown RBP16.2■□□□□ 0.18
DDX54-210ENST00000552375 KIF5BP33176 963 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 EXOSC10Q01780 885 aaKnown RBP16.2■□□□□ 0.18
DDX54-210ENST00000552375 BLOC1S2Q6QNY1 142 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 SEPT14Q6ZU15 432 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 Q6ZUG5 572 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 DHX32Q7L7V1 743 aaKnown RBP16.2■□□□□ 0.18
DDX54-210ENST00000552375 TMEM199Q8N511 208 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 KCNB2Q92953 911 aa16.2■□□□□ 0.18
DDX54-210ENST00000552375 PDCD2LQ9BRP1 358 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms