RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 USP17L1Q7RTZ2 530 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 AK8Q96MA6 479 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 TACO1Q9BSH4 297 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 LRRC1Q9BTT6 524 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 MAGEF1Q9HAY2 307 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 WDR17Q8IZU2 1322 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 UFL1O94874 794 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 ATP2C1P98194 919 aaPredicted RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 PLCB3Q01970 1234 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 SUSD4Q5VX71 490 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 MAEAQ7L5Y9 396 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 MRRFQ96E11 262 aaKnown RBP11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 OSBPL9Q96SU4 736 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 NT5C3AQ9H0P0 336 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 RAB17Q9H0T7 212 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 NKIRAS1Q9NYS0 192 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 L1RE1Q9UN81 338 aa11.24□□□□□ -0.61
SMARCC2-209ENST00000550164 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 GNA14O95837 355 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 MYL1P05976 194 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 MCTP2Q6DN12 878 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 USP17L2Q6R6M4 530 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 TBC1D31Q96DN5 1066 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 AP1M1Q9BXS5 423 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 EPB41L4AQ9HCS5 686 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 PSD3Q9NYI0 1048 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 PKD2L1Q9P0L9 805 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 ASIC3Q9UHC3 531 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 ZBTB21Q9ULJ3 1066 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 BAZ2BQ9UIF8 2168 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 LRRC53A6NM62 1247 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 LAD1O00515 517 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 RSRC2Q7L4I2 434 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 SPATA4Q8NEY3 305 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 HNRNPLLQ8WVV9 542 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 KIAA1024Q9UPX6 916 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 ATP8A1Q9Y2Q0 1164 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 FRMD3A2A2Y4 597 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 GNPATO15228 680 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 TOB1P50616 345 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 GFPT1Q06210 699 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 INTS8Q75QN2 995 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 SH2D3CQ8N5H7 860 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 MYCT1Q8N699 235 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 UBL4BQ8N7F7 174 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 STK38LQ9Y2H1 464 aa11.23□□□□□ -0.61
SMARCC2-209ENST00000550164 ZRANB2O95218 330 aaKnown RBP eCLIP11.22□□□□□ -0.613e-7■■■□□ 18.2
SMARCC2-209ENST00000550164 ERVK-24P63145 666 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 ZBTB16Q05516 673 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 SETDB1Q15047 1291 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 PFKFB3Q16875 520 aaPredicted RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 HPS3Q969F9 1004 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 CAPN11Q9UMQ6 739 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 NOVA2Q9UNW9 492 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 PREX1Q8TCU6 1659 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 PALMO75781 387 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 RPSAP08865 295 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 NR2F2P24468 414 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 DHX9Q08211 1270 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 EXOC3L4Q17RC7 722 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 GJA10Q969M2 543 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 CARD10Q9BWT7 1032 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 HPCAL4Q9UM19 191 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 COL4A3BPQ9Y5P4 624 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 CLTCQ00610 1675 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 ITSN1Q15811 1721 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 EXOC3O60645 756 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 FCER1AP12319 257 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 SF3B2Q13435 895 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 LLGL1Q15334 1064 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 TXNRD1Q16881 649 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 USH1GQ495M9 461 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 KSR1Q8IVT5 923 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 COA7Q96BR5 231 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 BICD1Q96G01 975 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 IFT74Q96LB3 600 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 PIGSQ96S52 555 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 TMEM51Q9NW97 253 aa11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 DDX25Q9UHL0 483 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 PACSIN2Q9UNF0 486 aaPredicted RBP11.22□□□□□ -0.61
SMARCC2-209ENST00000550164 LRRIQ3A6PVS8 624 aaPredicted RBP11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 SLC1A4P43007 532 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 SNCBQ16143 134 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 CCNI2Q6ZMN8 369 aaPredicted RBP11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 SRBD1Q8N5C6 995 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 TCP11Q8WWU5 503 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 ZC3H12CQ9C0D7 883 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 RNF14Q9UBS8 474 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 PLAAQ9Y263 795 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 RTCBQ9Y3I0 505 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 TECPR2O15040 1411 aa11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 PGRMC1O00264 195 aaKnown RBP11.21□□□□□ -0.61
SMARCC2-209ENST00000550164 CTNND1O60716 968 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms