RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 USP17L20D6RJB6 530 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 GOLGA6L22H0YM25 854 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 FOXN1O15353 648 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 EDIL3O43854 480 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 YEATS4O95619 227 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 GNA11P29992 359 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 USP17L24Q0WX57 530 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 SF3A1Q15459 793 aaKnown RBP9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 ANO1Q5XXA6 986 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 GADL1Q6ZQY3 521 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 PIK3AP1Q6ZUJ8 805 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 C2orf69Q8N8R5 385 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 PGBD1Q96JS3 809 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 SPATA32Q96LK8 384 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 AGBL1Q96MI9 1066 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 WBP1LQ9NX94 342 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 BIN2Q9UBW5 565 aaPredicted RBP9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 RCOR1Q9UKL0 485 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 ADAMTS5Q9UNA0 930 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 PCDHB6Q9Y5E3 794 aa9.26□□□□□ -0.93
DEPDC4-207ENST00000549249 VWA5AO00534 786 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 MEIS2O14770 477 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 ICAM1P05362 532 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 HOXA7P31268 230 aaPredicted RBP9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 INF2Q27J81 1249 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 RILPL1Q5EBL4 403 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 JAKMIP3Q5VZ66 844 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 GPAT2Q6NUI2 795 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 USP17L6PQ6QN14 398 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 KRT25Q7Z3Z0 450 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 REXO1Q8N1G1 1221 aaKnown RBP9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 GPT2Q8TD30 523 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 CUL5Q93034 780 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 SLC10A4Q96EP9 437 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 SCAND2PQ9GZW5 306 aaPredicted RBP9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 PSTPIP2Q9H939 334 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 RAVER2Q9HCJ3 691 aaKnown RBP9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 CFAP45Q9UL16 551 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 AGTPBP1Q9UPW5 1226 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 MYPNQ86TC9 1320 aa9.25□□□□□ -0.93
DEPDC4-207ENST00000549249 CCDC194A0A1B0GVG4 234 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 ATP2B1P20020 1258 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 COG2Q14746 738 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 SLC39A14Q15043 492 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 STK38Q15208 465 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 NONOQ15233 471 aaKnown RBP eCLIP9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 TTC38Q5R3I4 469 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 SPRYD7Q5W111 196 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 CPXCR1Q8N123 301 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 BICD2Q8TD16 824 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 CLEC4DQ8WXI8 215 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 TBC1D5Q92609 795 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 ZNF214Q9UL59 606 aaPredicted RBP9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 CCPG1Q9ULG6 757 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 MRVI1Q9Y6F6 885 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 ABCB11O95342 1321 aa9.24□□□□□ -0.93
DEPDC4-207ENST00000549249 ZNFX1Q9P2E3 1918 aaKnown RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 NFIBO00712 420 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 SPTLC2O15270 562 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 TRAK2O60296 914 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 PEX10O60683 326 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 ZBED4O75132 1171 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 FDX1P10109 184 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 PTMSP20962 102 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 MARCKSP29966 332 aaPredicted RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 TRAPPC10P48553 1259 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 MRPL12P52815 198 aaKnown RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 LBX1P52954 281 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 UBE2HP62256 183 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 GHRHRQ02643 423 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 SNAPC2Q13487 334 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 TMEM132BQ14DG7 1078 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 ZNF174Q15697 407 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 CSPP1Q1MSJ5 1256 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 TPRNQ4KMQ1 711 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 MUM1L1Q5H9M0 696 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 LBX2Q6XYB7 198 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 RASAL3Q86YV0 1011 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 TBCKQ8TEA7 893 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 BRI3BPQ8WY22 251 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 CAPNS2Q96L46 248 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 ANO3Q9BYT9 981 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 IRX2Q9BZI1 471 aaPredicted RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 BTBD7Q9P203 1132 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 KIAA1468Q9P260 1216 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 RABGEF1Q9UJ41 708 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 NOL7Q9UMY1 257 aaKnown RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 PCDHA7Q9UN72 937 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 MRPL11Q9Y3B7 192 aaKnown RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 RIPK3Q9Y572 518 aa9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 MORC2Q9Y6X9 1032 aaPredicted RBP9.23□□□□□ -0.93
DEPDC4-207ENST00000549249 BTBD19C9JJ37 291 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 PIK3CDO00329 1044 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 ATP2A1O14983 1001 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 PPP6R2O75170 966 aa9.22□□□□□ -0.93
DEPDC4-207ENST00000549249 CNMDO75829 334 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms