RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 KRT86O43790 486 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 RNF40O75150 1001 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 RPS12P25398 132 aaKnown RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 TNNT3P45378 269 aaPredicted RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 SCNN1DP51172 638 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 STIM1Q13586 685 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 KCNB1Q14721 858 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 CTR9Q6PD62 1173 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 KIAA1328Q86T90 577 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 C4orf32Q8N8J7 132 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 DISC1Q9NRI5 854 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 RNF216Q9NWF9 866 aaPredicted RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 MAGEC2Q9UBF1 373 aaPredicted RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 PSME4Q14997 1843 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 MYH13Q9UKX3 1938 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 ORC4O43929 436 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 SYF2O95926 243 aaKnown RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 CALML3P27482 149 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 CYLC1P35663 651 aaPredicted RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 DNM2P50570 870 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 MEA1Q16626 185 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 AFAP1L1Q8TED9 768 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 JAKMIP2Q96AA8 810 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 TRIM47Q96LD4 638 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 CNOT7Q9UIV1 285 aaKnown RBP12.81□□□□□ -0.36
DDB1-224ENST00000545894 HPCAL4Q9UM19 191 aa12.81□□□□□ -0.36
DDB1-224ENST00000545894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.81□□□□□ -0.36
DDB1-224ENST00000545894 USP17L12C9JPN9 530 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 USP17L21D6R901 530 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 PSMA7O14818 248 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 SRGAP2O75044 1071 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 MYL1P05976 194 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 SEMA3FQ13275 785 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 FOXR1Q6PIV2 292 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 LRRC31Q6UY01 552 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 NOC3LQ8WTT2 800 aaKnown RBP12.8□□□□□ -0.36
DDB1-224ENST00000545894 ZNHIT6Q9NWK9 470 aaKnown RBP12.8□□□□□ -0.36
DDB1-224ENST00000545894 TFR2Q9UP52 801 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 PCDHAC2Q9Y5I4 1007 aa12.8□□□□□ -0.36
DDB1-224ENST00000545894 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 ADAMTS3O15072 1205 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
DDB1-224ENST00000545894 IPO7O95373 1038 aaKnown RBP12.79□□□□□ -0.36
DDB1-224ENST00000545894 NAALADL2Q58DX5 795 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 BLIDQ8IZY5 108 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 RASSF8Q8NHQ8 419 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 COG1Q8WTW3 980 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 CAPZA3Q96KX2 299 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 NUP58Q9BVL2 599 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 GPRC5DQ9NZD1 345 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 RSPH14Q9UHP6 348 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 KLRC4O43908 158 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 NMT2O60551 498 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 VEGFAP15692 232 aaPredicted RBP12.79□□□□□ -0.36
DDB1-224ENST00000545894 KIF5BP33176 963 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 CRKP46108 304 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 ZNF280AP59817 542 aaPredicted RBP12.79□□□□□ -0.36
DDB1-224ENST00000545894 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 CCDC170Q8IYT3 715 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 CAGE1Q8TC20 777 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 EXOC1Q9NV70 894 aa12.79□□□□□ -0.36
DDB1-224ENST00000545894 B4DLN1 442 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 RHOBTB3O94955 611 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 TRIM21P19474 475 aaKnown RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 EPS15P42566 896 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 TTI2Q6NXR4 508 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 GIMAP8Q8ND71 665 aaPredicted RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 DHTKD1Q96HY7 919 aaPredicted RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 ZFP91Q96JP5 570 aaPredicted RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 MRIQ9BWK5 157 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 TTYH3Q9C0H2 523 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 GSTO1P78417 241 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 ZBED6P86452 979 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 HDLBPQ00341 1268 aaKnown RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 FAM47AQ5JRC9 791 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 IQCEQ6IPM2 695 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 OGFOD1Q8N543 542 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 FAM163AQ96GL9 167 aaPredicted RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 TUBGCP2Q9BSJ2 902 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 LACRTQ9GZZ8 138 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 NHEJ1Q9H9Q4 299 aaPredicted RBP12.78□□□□□ -0.36
DDB1-224ENST00000545894 SH3GLB2Q9NR46 395 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 AGPAT5Q9NUQ2 364 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 PCDHA4Q9UN74 947 aa12.78□□□□□ -0.36
DDB1-224ENST00000545894 RCCD1A6NED2 376 aa12.77□□□□□ -0.36
DDB1-224ENST00000545894 POTECB2RU33 542 aa12.77□□□□□ -0.36
DDB1-224ENST00000545894 PPFIA4O75335 1185 aa12.77□□□□□ -0.36
DDB1-224ENST00000545894 EGFRP00533 1210 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms