RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 CYP39A1Q9NYL5 469 aa13.95□□□□□ -0.18
GABPB1-206ENST00000543881 CCPG1Q9ULG6 757 aa13.95□□□□□ -0.18
GABPB1-206ENST00000543881 HCN4Q9Y3Q4 1203 aa13.95□□□□□ -0.18
GABPB1-206ENST00000543881 EPOPA6NHQ4 379 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 ICAM1P05362 532 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 PDHBP11177 359 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 PCP11498 1178 aaKnown RBP13.94□□□□□ -0.18
GABPB1-206ENST00000543881 ACTN1P12814 892 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 PDE4AP27815 886 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 MFAP1P55081 439 aaKnown RBP13.94□□□□□ -0.18
GABPB1-206ENST00000543881 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 KIAA1211Q6ZU35 1233 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 ZKSCAN3Q9BRR0 538 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 IL25Q9H293 177 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 VTA1Q9NP79 307 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 LCTP09848 1927 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 TNKSO95271 1327 aa13.94□□□□□ -0.18
GABPB1-206ENST00000543881 ZNF213O14771 459 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 TLL1O43897 1013 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 TMEM31Q5JXX7 168 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 TTC14Q96N46 770 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 SLC9A7Q96T83 725 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 DIAPH3Q9NSV4 1193 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 LAMA4Q16363 1823 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 NFIBO00712 420 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 PURAQ00577 322 aaKnown RBP13.93□□□□□ -0.18
GABPB1-206ENST00000543881 TAP1Q03518 808 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 ZNF543Q08ER8 600 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 PHOSPHO2Q8TCD6 241 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 ESR2Q92731 530 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 HLA-CQ95604 372 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 RNF41Q9H4P4 317 aaPredicted RBP13.93□□□□□ -0.18
GABPB1-206ENST00000543881 POLR3EQ9NVU0 708 aa13.93□□□□□ -0.18
GABPB1-206ENST00000543881 KIF28PB7ZC32 967 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 ARHGEF15O94989 841 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 MYL3P08590 195 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 GSPT1P15170 499 aaKnown RBP13.92□□□□□ -0.18
GABPB1-206ENST00000543881 RFC2P35250 354 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 BAATQ14032 418 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-206ENST00000543881 HERC6Q8IVU3 1022 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 MORC4Q8TE76 937 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 CLEC4DQ8WXI8 215 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 DSCC1Q9BVC3 393 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 CPVLQ9H3G5 476 aa13.92□□□□□ -0.18
GABPB1-206ENST00000543881 HIP1O00291 1037 aa13.91□□□□□ -0.18
GABPB1-206ENST00000543881 KDM4AO75164 1064 aa13.91□□□□□ -0.18
GABPB1-206ENST00000543881 IQCF3P0C7M6 154 aa13.91□□□□□ -0.18
GABPB1-206ENST00000543881 GOLGA8HP0CJ92 632 aa13.91□□□□□ -0.18
GABPB1-206ENST00000543881 CPT1AP50416 773 aa13.91□□□□□ -0.18
GABPB1-206ENST00000543881 IRX6P78412 446 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-206ENST00000543881 DGKHQ86XP1 1220 aa13.91□□□□□ -0.18
GABPB1-206ENST00000543881 KHSRPQ92945 711 aaKnown RBP eCLIP13.91□□□□□ -0.182e-9■□□□□ 9.6
GABPB1-206ENST00000543881 MTG1Q9BT17 334 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-206ENST00000543881 WDR11Q9BZH6 1224 aa13.91□□□□□ -0.18
GABPB1-206ENST00000543881 FTOQ9C0B1 505 aaKnown RBP eCLIP13.91□□□□□ -0.18
GABPB1-206ENST00000543881 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-206ENST00000543881 B4E1Z4 1266 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 GRB10Q13322 594 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 NBPF20Q3BBV1 942 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 FAM47CQ5HY64 1035 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 SLC30A10Q6XR72 485 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 RETREG2Q8NC44 543 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 UBA5Q9GZZ9 404 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 ZSWIM5Q9P217 1185 aa13.9□□□□□ -0.18
GABPB1-206ENST00000543881 TANC1Q9C0D5 1861 aa13.9□□□□□ -0.19
GABPB1-206ENST00000543881 SCN10AQ9Y5Y9 1956 aa13.9□□□□□ -0.19
GABPB1-206ENST00000543881 GPR37L1O60883 481 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 ALDH5A1P51649 535 aaPredicted RBP13.89□□□□□ -0.19
GABPB1-206ENST00000543881 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 PNMA1Q8ND90 353 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 OR6J1Q8NGC5 347 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 PPP1R13LQ8WUF5 828 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 ANKS1AQ92625 1134 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 C11orf16Q9NQ32 467 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 ADD3Q9UEY8 706 aaKnown RBP13.89□□□□□ -0.19
GABPB1-206ENST00000543881 TET1Q8NFU7 2136 aa13.89□□□□□ -0.19
GABPB1-206ENST00000543881 COL4A4P53420 1690 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-206ENST00000543881 RBM47A0AV96 593 aaKnown RBP13.88□□□□□ -0.19
GABPB1-206ENST00000543881 PTPDC1A2A3K4 754 aa13.88□□□□□ -0.19
GABPB1-206ENST00000543881 FAM86C2PA6NEL3 165 aa13.88□□□□□ -0.19
GABPB1-206ENST00000543881 LPXNO60711 386 aa13.88□□□□□ -0.19
GABPB1-206ENST00000543881 IMMTQ16891 758 aaKnown RBP13.88□□□□□ -0.19
GABPB1-206ENST00000543881 GPATCH4Q5T3I0 446 aaKnown RBP13.88□□□□□ -0.19
GABPB1-206ENST00000543881 NFRKBQ6P4R8 1299 aa13.88□□□□□ -0.19
GABPB1-206ENST00000543881 SPRED2Q7Z698 418 aa13.88□□□□□ -0.19
GABPB1-206ENST00000543881 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
GABPB1-206ENST00000543881 ENAHQ8N8S7 591 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-206ENST00000543881 ZSCAN10Q96SZ4 725 aaPredicted RBP13.88□□□□□ -0.19
GABPB1-206ENST00000543881 WDR19Q8NEZ3 1342 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 RAD50Q92878 1312 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 LOC102724159A0A0B4J2E5 919 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 BAIAP3O94812 1187 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 CALML3P27482 149 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 NT5C2P49902 561 aa13.87□□□□□ -0.19
GABPB1-206ENST00000543881 RPS6P62753 249 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms