RNA–Protein interactions for RNA: ENST00000543445.5

LDHA-221, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-221ENST00000543445 S100BP04271 92 aaPredicted RBP7.54□□□□□ -1.2
LDHA-221ENST00000543445 ITGA6P23229 1130 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 PCBP4P57723 403 aaKnown RBP7.54□□□□□ -1.2
LDHA-221ENST00000543445 CIAPIN1Q6FI81 312 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 DDX46Q7L014 1031 aaKnown RBP7.54□□□□□ -1.2
LDHA-221ENST00000543445 SAPCD2Q86UD0 394 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 TAB3Q8N5C8 712 aaPredicted RBP7.54□□□□□ -1.2
LDHA-221ENST00000543445 SUPT20HQ8NEM7 779 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 PLBD2Q8NHP8 589 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 TMEM40Q8WWA1 233 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 CELF1Q92879 486 aaKnown RBP7.54□□□□□ -1.2
LDHA-221ENST00000543445 RUNDC1Q96C34 613 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 FAM89AQ96GI7 184 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 ZC3H12CQ9C0D7 883 aaKnown RBP7.54□□□□□ -1.2
LDHA-221ENST00000543445 ATP13A2Q9NQ11 1180 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 PLAAQ9Y263 795 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 LAS1LQ9Y4W2 734 aaKnown RBP7.54□□□□□ -1.2
LDHA-221ENST00000543445 LRRC37AA6NMS7 1700 aa7.54□□□□□ -1.2
LDHA-221ENST00000543445 CDHR2Q9BYE9 1310 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 DDX60Q8IY21 1712 aaKnown RBP7.53□□□□□ -1.2
LDHA-221ENST00000543445 SOX1O00570 391 aaPredicted RBP7.53□□□□□ -1.2
LDHA-221ENST00000543445 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 BMP4P12644 408 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 MAP2K1Q02750 393 aaPredicted RBP7.53□□□□□ -1.2
LDHA-221ENST00000543445 GSTM4Q03013 218 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 GRM1Q13255 1194 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 NCAPHQ15003 741 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 SF3B3Q15393 1217 aaKnown RBP7.53□□□□□ -1.2
LDHA-221ENST00000543445 HGSNATQ68CP4 663 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 VHLLQ6RSH7 139 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 KRT26Q7Z3Y9 468 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 CACTIN-AS1Q8N1I8 211 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 CRIPAKQ8N1N5 446 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 TNFRSF25Q93038 417 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 GPR101Q96P66 508 aaPredicted RBP7.53□□□□□ -1.2
LDHA-221ENST00000543445 MBIPQ9NS73 344 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 TYW1Q9NV66 732 aaKnown RBP7.53□□□□□ -1.2
LDHA-221ENST00000543445 FRRS1LQ9P0K9 344 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 DBF4Q9UBU7 674 aaPredicted RBP7.53□□□□□ -1.2
LDHA-221ENST00000543445 POLLQ9UGP5 575 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 SNCAIPQ9Y6H5 919 aa7.53□□□□□ -1.2
LDHA-221ENST00000543445 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 GFRA2O00451 464 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 CELF2O95319 508 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 VIL1P09327 827 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 PDGFRBP09619 1106 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 HOXB7P09629 217 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 CDK8P49336 464 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 ARL4DP49703 201 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 GPSM2P81274 684 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 HNRNPUQ00839 825 aaKnown RBP eCLIP7.52□□□□□ -1.21
LDHA-221ENST00000543445 TRIM28Q13263 835 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 TMEM67Q5HYA8 995 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 WIPI1Q5MNZ9 446 aaPredicted RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 DUSP27Q5VZP5 1158 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 INTS3Q68E01 1043 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 MRM1Q6IN84 353 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 GDF6Q6KF10 455 aaPredicted RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 HDXQ7Z353 690 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 GPBAR1Q8TDU6 330 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 STAG1Q8WVM7 1258 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 ABHD8Q96I13 439 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 LPIN3Q9BQK8 851 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 CORO1BQ9BR76 489 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 SPATA9Q9BWV2 254 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 TMX4Q9H1E5 349 aaPredicted RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 SOX17Q9H6I2 414 aaPredicted RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 PHAXQ9H814 394 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 DBNDD1Q9H9R9 158 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 GMIPQ9P107 970 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 CNOT7Q9UIV1 285 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 G3BP2Q9UN86 482 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 NSFL1CQ9UNZ2 370 aaKnown RBP7.52□□□□□ -1.21
LDHA-221ENST00000543445 PPME1Q9Y570 386 aa7.52□□□□□ -1.21
LDHA-221ENST00000543445 TAF1P21675 1872 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 H3BRJ5 948 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 PSMD14O00487 310 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 IRS4O14654 1257 aaPredicted RBP7.51□□□□□ -1.21
LDHA-221ENST00000543445 CYP11A1P05108 521 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 FAM153BP0C7A2 387 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 PLCG1P19174 1290 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 EPHA1P21709 976 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 CNGA1P29973 690 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 MAP2K2P36507 400 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 ECE1P42892 770 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 PDE4BQ07343 736 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 TNIP1Q15025 636 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 LONRF2Q1L5Z9 754 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 FERMT3Q86UX7 667 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 LRRC47Q8N1G4 583 aaKnown RBP7.51□□□□□ -1.21
LDHA-221ENST00000543445 TBC1D16Q8TBP0 767 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 PLPPR2Q96GM1 343 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 HHIPL1Q96JK4 782 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 AVENQ9NQS1 362 aaPredicted RBP7.51□□□□□ -1.21
LDHA-221ENST00000543445 HYPKQ9NX55 129 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 REV1Q9UBZ9 1251 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
LDHA-221ENST00000543445 WTIPA6NIX2 430 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms