RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 SENP6Q9GZR1 1112 aaPredicted RBP26.6■■□□□ 1.85
CLTA-210ENST00000540080 PXMP2Q9NR77 195 aa26.6■■□□□ 1.85
CLTA-210ENST00000540080 COL6A1P12109 1028 aa26.59■■□□□ 1.85
CLTA-210ENST00000540080 IQSEC1Q6DN90 963 aa26.59■■□□□ 1.85
CLTA-210ENST00000540080 RNF180Q86T96 592 aa26.59■■□□□ 1.85
CLTA-210ENST00000540080 IWS1Q96ST2 819 aa26.59■■□□□ 1.85
CLTA-210ENST00000540080 TNRC18O15417 2968 aaPredicted RBP26.59■■□□□ 1.85
CLTA-210ENST00000540080 SYNRGQ9UMZ2 1314 aa26.59■■□□□ 1.85
CLTA-210ENST00000540080 SMPD1P17405 629 aa26.58■■□□□ 1.85
CLTA-210ENST00000540080 PTGS1P23219 599 aa26.58■■□□□ 1.85
CLTA-210ENST00000540080 TMEM63BQ5T3F8 832 aa26.58■■□□□ 1.85
CLTA-210ENST00000540080 NCOA5Q9HCD5 579 aaKnown RBP26.58■■□□□ 1.85
CLTA-210ENST00000540080 NID2Q14112 1375 aa26.58■■□□□ 1.84
CLTA-210ENST00000540080 LRRC37A2A6NM11 1700 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 ADAMTS4O75173 837 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 IRX5P78411 483 aaPredicted RBP26.57■■□□□ 1.84
CLTA-210ENST00000540080 WWC2Q6AWC2 1192 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 USP17L6PQ6QN14 398 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 SMARCC2Q8TAQ2 1214 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 CUL5Q93034 780 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 IL17RAQ96F46 866 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 ZNF274Q96GC6 653 aaPredicted RBP26.57■■□□□ 1.84
CLTA-210ENST00000540080 PSTPIP2Q9H939 334 aa26.57■■□□□ 1.84
CLTA-210ENST00000540080 MYADML2A6NDP7 307 aa26.56■■□□□ 1.84
CLTA-210ENST00000540080 PPFIA3O75145 1194 aa26.56■■□□□ 1.84
CLTA-210ENST00000540080 NR3C2P08235 984 aa26.56■■□□□ 1.84
CLTA-210ENST00000540080 C6orf222P0C671 652 aaPredicted RBP26.56■■□□□ 1.84
CLTA-210ENST00000540080 MYCLP12524 364 aaPredicted RBP26.56■■□□□ 1.84
CLTA-210ENST00000540080 STK3Q13188 491 aa26.56■■□□□ 1.84
CLTA-210ENST00000540080 STXBP2Q15833 593 aa26.56■■□□□ 1.84
CLTA-210ENST00000540080 WDR11Q9BZH6 1224 aa26.56■■□□□ 1.84
CLTA-210ENST00000540080 SPC25Q9HBM1 224 aa26.56■■□□□ 1.84
CLTA-210ENST00000540080 GNEQ9Y223 722 aaKnown RBP26.56■■□□□ 1.84
CLTA-210ENST00000540080 SEPT14Q6ZU15 432 aa26.55■■□□□ 1.84
CLTA-210ENST00000540080 PHKBQ93100 1093 aa26.55■■□□□ 1.84
CLTA-210ENST00000540080 FERMT2Q96AC1 680 aa26.55■■□□□ 1.84
CLTA-210ENST00000540080 PDCD2LQ9BRP1 358 aa26.55■■□□□ 1.84
CLTA-210ENST00000540080 RBM47A0AV96 593 aaKnown RBP26.54■■□□□ 1.84
CLTA-210ENST00000540080 MEIS2O14770 477 aa26.54■■□□□ 1.84
CLTA-210ENST00000540080 DYNC1LI2O43237 492 aaPredicted RBP26.54■■□□□ 1.84
CLTA-210ENST00000540080 NAPAP54920 295 aa26.54■■□□□ 1.84
CLTA-210ENST00000540080 GJA9P57773 515 aa26.54■■□□□ 1.84
CLTA-210ENST00000540080 NTRK3Q16288 839 aa26.54■■□□□ 1.84
CLTA-210ENST00000540080 TLK2Q86UE8 772 aa26.54■■□□□ 1.84
CLTA-210ENST00000540080 KLHDC9Q8NEP7 349 aa26.54■■□□□ 1.84
CLTA-210ENST00000540080 AP5M1Q9H0R1 490 aa26.54■■□□□ 1.84
CLTA-210ENST00000540080 UPF3AQ9H1J1 476 aaKnown RBP26.54■■□□□ 1.84
CLTA-210ENST00000540080 ALDH8A1Q9H2A2 487 aaPredicted RBP26.54■■□□□ 1.84
CLTA-210ENST00000540080 PIK3CDO00329 1044 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 EVI5O60447 810 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 NEK4P51957 841 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 ATN1P54259 1190 aaPredicted RBP26.53■■□□□ 1.84
CLTA-210ENST00000540080 AK2P54819 239 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 AKAP17AQ02040 695 aaKnown RBP26.53■■□□□ 1.84
CLTA-210ENST00000540080 PGM5Q15124 567 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 KCNA10Q16322 511 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 DUSP28Q4G0W2 176 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 TYW1BQ6NUM6 668 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 IL31RAQ8NI17 732 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 SCFD2Q8WU76 684 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 PHF24Q9UPV7 400 aa26.53■■□□□ 1.84
CLTA-210ENST00000540080 STXBP3O00186 592 aa26.52■■□□□ 1.84
CLTA-210ENST00000540080 PRPF3O43395 683 aaKnown RBP26.52■■□□□ 1.84
CLTA-210ENST00000540080 EIF3JO75822 258 aaKnown RBP26.52■■□□□ 1.84
CLTA-210ENST00000540080 BEX3Q00994 111 aa26.52■■□□□ 1.84
CLTA-210ENST00000540080 UBE2SQ16763 222 aa26.52■■□□□ 1.84
CLTA-210ENST00000540080 PFKFB3Q16875 520 aaPredicted RBP26.52■■□□□ 1.84
CLTA-210ENST00000540080 GNASQ5JWF2 1037 aa26.52■■□□□ 1.84
CLTA-210ENST00000540080 ZFP91Q96JP5 570 aaPredicted RBP26.52■■□□□ 1.84
CLTA-210ENST00000540080 SLC26A6Q9BXS9 759 aa26.52■■□□□ 1.84
CLTA-210ENST00000540080 BARHL2Q9NY43 387 aa26.52■■□□□ 1.84
CLTA-210ENST00000540080 TPCN1Q9ULQ1 816 aa26.52■■□□□ 1.84
CLTA-210ENST00000540080 CTAGE5O15320 804 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 TXNP10599 105 aaKnown RBP26.51■■□□□ 1.83
CLTA-210ENST00000540080 SCG2P13521 617 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 IFNAR1P17181 557 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 ACLYP53396 1101 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 TTLL4Q14679 1199 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 ANKRD1Q15327 319 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 LRRC26Q2I0M4 334 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 CCSAPQ6IQ19 270 aaPredicted RBP26.51■■□□□ 1.83
CLTA-210ENST00000540080 VSIG10LQ86VR7 867 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 TSEN34Q9BSV6 310 aaKnown RBP26.51■■□□□ 1.83
CLTA-210ENST00000540080 Q9Y3F1 56 aa26.51■■□□□ 1.83
CLTA-210ENST00000540080 hCG_1984214I3L0E3 225 aa26.5■■□□□ 1.83
CLTA-210ENST00000540080 CPLX1O14810 134 aa26.5■■□□□ 1.83
CLTA-210ENST00000540080 ARIH2O95376 493 aa26.5■■□□□ 1.83
CLTA-210ENST00000540080 CST5P28325 142 aaPredicted RBP26.5■■□□□ 1.83
CLTA-210ENST00000540080 CCND2P30279 289 aa26.5■■□□□ 1.83
CLTA-210ENST00000540080 PKN1Q16512 942 aa26.5■■□□□ 1.83
CLTA-210ENST00000540080 ZNF713Q8N859 430 aaPredicted RBP26.5■■□□□ 1.83
CLTA-210ENST00000540080 C22orf23Q9BZE7 217 aa26.5■■□□□ 1.83
CLTA-210ENST00000540080 SLKQ9H2G2 1235 aaPredicted RBP26.5■■□□□ 1.83
CLTA-210ENST00000540080 RBM27Q9P2N5 1060 aaKnown RBP26.5■■□□□ 1.83
CLTA-210ENST00000540080 SMCO2A6NFE2 343 aa26.49■■□□□ 1.83
CLTA-210ENST00000540080 FSCN1Q16658 493 aaKnown RBP26.49■■□□□ 1.83
CLTA-210ENST00000540080 PPP1R18Q6NYC8 613 aa26.49■■□□□ 1.83
CLTA-210ENST00000540080 C7orf61Q8IZ16 206 aa26.49■■□□□ 1.83
CLTA-210ENST00000540080 PCSK9Q8NBP7 692 aaKnown RBP26.49■■□□□ 1.83
CLTA-210ENST00000540080 COPS5Q92905 334 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms