RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
LTBR-206ENST00000536876 NFRKBQ6P4R8 1299 aa20.69■□□□□ 0.9
LTBR-206ENST00000536876 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
LTBR-206ENST00000536876 GPCPD1Q9NPB8 672 aa20.69■□□□□ 0.9
LTBR-206ENST00000536876 RPS6P62753 249 aaKnown RBP20.68■□□□□ 0.9
LTBR-206ENST00000536876 PPP2R5BQ15173 497 aa20.68■□□□□ 0.9
LTBR-206ENST00000536876 ALX1Q15699 326 aa20.68■□□□□ 0.9
LTBR-206ENST00000536876 HERC6Q8IVU3 1022 aa20.68■□□□□ 0.9
LTBR-206ENST00000536876 MYH7BA7E2Y1 1941 aa20.67■□□□□ 0.9
LTBR-206ENST00000536876 SNHG28P0DPA3 235 aa20.67■□□□□ 0.9
LTBR-206ENST00000536876 TOP1P11387 765 aaKnown RBP20.67■□□□□ 0.9
LTBR-206ENST00000536876 TCTN1Q2MV58 587 aa20.67■□□□□ 0.9
LTBR-206ENST00000536876 RNF207Q6ZRF8 634 aa20.67■□□□□ 0.9
LTBR-206ENST00000536876 TSPYL2Q9H2G4 693 aaPredicted RBP20.67■□□□□ 0.9
LTBR-206ENST00000536876 WDR19Q8NEZ3 1342 aa20.67■□□□□ 0.9
LTBR-206ENST00000536876 MICAL3Q7RTP6 2002 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 A0A0D9SFI3 127 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 LCHNA4D1U4 455 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 NKRFO15226 690 aaKnown RBP eCLIP20.66■□□□□ 0.9
LTBR-206ENST00000536876 ZNF543Q08ER8 600 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 GRB10Q13322 594 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 SKIV2LQ15477 1246 aaKnown RBP20.66■□□□□ 0.9
LTBR-206ENST00000536876 TMCO2Q7Z6W1 182 aaPredicted RBP20.66■□□□□ 0.9
LTBR-206ENST00000536876 PHOSPHO2Q8TCD6 241 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 SCFD2Q8WU76 684 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 ARNTL2Q8WYA1 636 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 DHX38Q92620 1227 aaKnown RBP20.66■□□□□ 0.9
LTBR-206ENST00000536876 FAM227BQ96M60 508 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 TCP11L1Q9NUJ3 509 aa20.66■□□□□ 0.9
LTBR-206ENST00000536876 ATG2AQ2TAZ0 1938 aa20.65■□□□□ 0.9
LTBR-206ENST00000536876 TLL1O43897 1013 aa20.65■□□□□ 0.9
LTBR-206ENST00000536876 ACTN1P12814 892 aa20.65■□□□□ 0.9
LTBR-206ENST00000536876 PTPN11Q06124 597 aaPredicted RBP20.65■□□□□ 0.9
LTBR-206ENST00000536876 PDE4DQ08499 809 aa20.65■□□□□ 0.9
LTBR-206ENST00000536876 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
LTBR-206ENST00000536876 CCDC62Q6P9F0 684 aa20.65■□□□□ 0.9
LTBR-206ENST00000536876 ZNF589Q86UQ0 364 aaPredicted RBP20.65■□□□□ 0.9
LTBR-206ENST00000536876 KHSRPQ92945 711 aaKnown RBP eCLIP20.65■□□□□ 0.9
LTBR-206ENST00000536876 CPVLQ9H3G5 476 aa20.65■□□□□ 0.9
LTBR-206ENST00000536876 EPHX3Q9H6B9 360 aa20.65■□□□□ 0.9
LTBR-206ENST00000536876 ZMYM6O95789 1325 aa20.64■□□□□ 0.89
LTBR-206ENST00000536876 FGAP02671 866 aa20.64■□□□□ 0.89
LTBR-206ENST00000536876 WDR5P61964 334 aaKnown RBP20.64■□□□□ 0.89
LTBR-206ENST00000536876 AAK1Q2M2I8 961 aa20.64■□□□□ 0.89
LTBR-206ENST00000536876 TBC1D10CQ8IV04 446 aa20.64■□□□□ 0.89
LTBR-206ENST00000536876 DNERQ8NFT8 737 aa20.64■□□□□ 0.89
LTBR-206ENST00000536876 KAT2BQ92831 832 aa20.64■□□□□ 0.89
LTBR-206ENST00000536876 GPHNQ9NQX3 736 aaPredicted RBP20.64■□□□□ 0.89
LTBR-206ENST00000536876 COL20A1Q9P218 1284 aa20.64■□□□□ 0.89
LTBR-206ENST00000536876 RAD50Q92878 1312 aa20.63■□□□□ 0.89
LTBR-206ENST00000536876 GTPBP6O43824 516 aaPredicted RBP20.63■□□□□ 0.89
LTBR-206ENST00000536876 TXNP10599 105 aaKnown RBP20.63■□□□□ 0.89
LTBR-206ENST00000536876 DEFB103AP81534 67 aa20.63■□□□□ 0.89
LTBR-206ENST00000536876 ARHGAP1Q07960 439 aa20.63■□□□□ 0.89
LTBR-206ENST00000536876 GDF6Q6KF10 455 aaPredicted RBP20.63■□□□□ 0.89
LTBR-206ENST00000536876 C11orf16Q9NQ32 467 aa20.63■□□□□ 0.89
LTBR-206ENST00000536876 NEDD4P46934 1319 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 KPNA6O60684 536 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 BAIAP3O94812 1187 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 MMP3P08254 477 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 HAND2P61296 217 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 BFSP2Q13515 415 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 SESTD1Q86VW0 696 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 GDPD5Q8WTR4 605 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 AFG1LQ8WV93 481 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 TBC1D5Q92609 795 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 C1QTNF1Q9BXJ1 281 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 FTOQ9C0B1 505 aaKnown RBP eCLIP20.62■□□□□ 0.89
LTBR-206ENST00000536876 HELLSQ9NRZ9 838 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 TOMM22Q9NS69 142 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 COG5Q9UP83 839 aa20.62■□□□□ 0.89
LTBR-206ENST00000536876 RBL2Q08999 1139 aa20.61■□□□□ 0.89
LTBR-206ENST00000536876 PTGISQ16647 500 aa20.61■□□□□ 0.89
LTBR-206ENST00000536876 RETREG2Q8NC44 543 aa20.61■□□□□ 0.89
LTBR-206ENST00000536876 FAM122AQ96E09 287 aa20.61■□□□□ 0.89
LTBR-206ENST00000536876 LRFN3Q9BTN0 628 aa20.61■□□□□ 0.89
LTBR-206ENST00000536876 NLRC5Q86WI3 1866 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 NBNO60934 754 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 CXCL10P02778 98 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 GOLGA8HP0CJ92 632 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
LTBR-206ENST00000536876 USH1GQ495M9 461 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 BRDTQ58F21 947 aaPredicted RBP20.6■□□□□ 0.89
LTBR-206ENST00000536876 TRAF7Q6Q0C0 670 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 CAGE1Q8TC20 777 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 AFAP1L1Q8TED9 768 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 WNT8BQ93098 351 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 EVI5LQ96CN4 794 aa20.6■□□□□ 0.89
LTBR-206ENST00000536876 HOXD11P31277 338 aaPredicted RBP20.59■□□□□ 0.89
LTBR-206ENST00000536876 LY6KQ17RY6 165 aa20.59■□□□□ 0.89
LTBR-206ENST00000536876 LRRC8DQ7L1W4 858 aa20.59■□□□□ 0.89
LTBR-206ENST00000536876 RGS22Q8NE09 1264 aa20.59■□□□□ 0.89
LTBR-206ENST00000536876 TAAR1Q96RJ0 339 aa20.59■□□□□ 0.89
LTBR-206ENST00000536876 CD320Q9NPF0 282 aa20.59■□□□□ 0.89
LTBR-206ENST00000536876 SELPP16109 830 aa20.58■□□□□ 0.89
LTBR-206ENST00000536876 PDE1AP54750 535 aa20.58■□□□□ 0.89
LTBR-206ENST00000536876 CHMP4BP1P59074 171 aa20.58■□□□□ 0.89
LTBR-206ENST00000536876 NMIQ13287 307 aaPredicted RBP20.58■□□□□ 0.89
LTBR-206ENST00000536876 MBTPS1Q14703 1052 aa20.58■□□□□ 0.89
LTBR-206ENST00000536876 TRIM71Q2Q1W2 868 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms