RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 AMNQ9BXJ7 453 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 SENP2Q9HC62 589 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 COL20A1Q9P218 1284 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 MAD2L2Q9UI95 211 aa9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 RBM8AQ9Y5S9 174 aaKnown RBP9.93□□□□□ -0.82
SFSWAP-202ENST00000535202 KIAA1217Q5T5P2 1943 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 GRIN2DO15399 1336 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 PALM3A6NDB9 673 aaPredicted RBP9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 NKRFO15226 690 aaKnown RBP eCLIP9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 CFBP00751 764 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 CD4P01730 458 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 ANTXR2P58335 489 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 PPIGQ13427 754 aaKnown RBP eCLIP9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 TTLL4Q14679 1199 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 TMEM67Q5HYA8 995 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 L1TD1Q5T7N2 865 aaKnown RBP9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 ZNF697Q5TEC3 545 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 ARHGEF16Q5VV41 709 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 MFSD5Q6N075 450 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 SEPT14Q6ZU15 432 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 SKAP1Q86WV1 359 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 MB21D2Q8IYB1 491 aaPredicted RBP9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 SLC43A3Q8NBI5 491 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 FAM161BQ96MY7 647 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 RMDN3Q96TC7 470 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 GPHNQ9NQX3 736 aaPredicted RBP9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 POLR3EQ9NVU0 708 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 MTMR10Q9NXD2 777 aa9.92□□□□□ -0.82
SFSWAP-202ENST00000535202 LAMA3Q16787 3333 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 ZBTB5O15062 677 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 B4GALT4O60513 344 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 PPP1R11O60927 126 aaPredicted RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 ARIH2O95376 493 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 TXNP10599 105 aaKnown RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 EIF2AK2P19525 551 aaKnown RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 CYP2C18P33260 490 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 PURAQ00577 322 aaKnown RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 HSP90AA2PQ14568 343 aaPredicted RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 NFKBIBQ15653 356 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 BRDTQ58F21 947 aaPredicted RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 CATIPQ7Z7H3 387 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 TMEM199Q8N511 208 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 NSUN6Q8TEA1 469 aaKnown RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 MTMR8Q96EF0 704 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 PIGSQ96S52 555 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 ESYT1Q9BSJ8 1104 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 MTG1Q9BT17 334 aaPredicted RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 MAF1Q9H063 256 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 LSG1Q9H089 658 aaKnown RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 TRPV6Q9H1D0 765 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 HIPK3Q9H422 1215 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 PCDHA1Q9Y5I3 950 aa9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 BAZ2BQ9UIF8 2168 aaKnown RBP9.91□□□□□ -0.82
SFSWAP-202ENST00000535202 UMODL1Q5DID0 1318 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 OPLAHO14841 1288 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 ACRP10323 421 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 CSF2RAP15509 400 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 HOXA13P31271 388 aaPredicted RBP9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 SMAD3P84022 425 aaKnown RBP9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 TROAPQ12815 778 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 STXBP2Q15833 593 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 SLC35G1Q2M3R5 365 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 FAM47CQ5HY64 1035 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 FAM109BQ6ICB4 259 aaPredicted RBP9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 CASC1Q6TDU7 716 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 CENPQQ7L2Z9 268 aaPredicted RBP9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 IGDCC4Q8TDY8 1250 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 PPP1R13LQ8WUF5 828 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 PIBF1Q8WXW3 757 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 IWS1Q96ST2 819 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.9□□□□□ -0.823e-14■□□□□ 8.6
SFSWAP-202ENST00000535202 MYL10Q9BUA6 226 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 SEZ6LQ9BYH1 1024 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 RIOX1Q9H6W3 641 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 ANO2Q9NQ90 1003 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 PXMP2Q9NR77 195 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 STXBP5LQ9Y2K9 1186 aa9.9□□□□□ -0.82
SFSWAP-202ENST00000535202 SCN10AQ9Y5Y9 1956 aa9.9□□□□□ -0.83
SFSWAP-202ENST00000535202 A6NJR5 290 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 SLC27A2O14975 620 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 PRC1O43663 620 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 CYTH3O43739 400 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 KPNA6O60684 536 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 GH1P01241 217 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 HSP90AA1P07900 732 aaKnown RBP9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 NR3C2P08235 984 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 MYCLP12524 364 aaPredicted RBP9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 HSD17B4P51659 736 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 CCL23P55773 120 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 CHMP4BP1P59074 171 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 LY6KQ17RY6 165 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 TMEM240Q5SV17 173 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 CREB3L3Q68CJ9 461 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 CCDC62Q6P9F0 684 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 PSRC1Q6PGN9 363 aaPredicted RBP9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 NFXL1Q6ZNB6 911 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 ZNF654Q8IZM8 581 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 CTCFLQ8NI51 663 aaPredicted RBP9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 GUCD1Q96NT3 240 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 NOC4LQ9BVI4 516 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms