RNA–Protein interactions for RNA: ENST00000533411.5

SOX6-215, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-215ENST00000533411 SPICE1Q8N0Z3 855 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 LRRC47Q8N1G4 583 aaKnown RBP8.01□□□□□ -1.13
SOX6-215ENST00000533411 KRI1Q8N9T8 703 aaKnown RBP8.01□□□□□ -1.13
SOX6-215ENST00000533411 SLAIN1Q8ND83 568 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 GPRC5AQ8NFJ5 357 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 PIBF1Q8WXW3 757 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 SHISA4Q96DD7 197 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 RRP36Q96EU6 259 aaKnown RBP8.01□□□□□ -1.13
SOX6-215ENST00000533411 PANK2Q9BZ23 570 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 RNF208Q9H0X6 261 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 RBSNQ9H1K0 784 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 MTMR4Q9NYA4 1195 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 BTBD7Q9P203 1132 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 GJD2Q9UKL4 321 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 PCDHA7Q9UN72 937 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 PDE4DIPQ5VU43 2346 aa8.01□□□□□ -1.13
SOX6-215ENST00000533411 PDHBP11177 359 aa8□□□□□ -1.13
SOX6-215ENST00000533411 EEF2P13639 858 aaKnown RBP8□□□□□ -1.13
SOX6-215ENST00000533411 CYP2B6P20813 491 aa8□□□□□ -1.13
SOX6-215ENST00000533411 CMA1P23946 247 aa8□□□□□ -1.13
SOX6-215ENST00000533411 SMARCA1P28370 1054 aa8□□□□□ -1.13
SOX6-215ENST00000533411 TRAPPC10P48553 1259 aa8□□□□□ -1.13
SOX6-215ENST00000533411 UBXN2AP68543 259 aa8□□□□□ -1.13
SOX6-215ENST00000533411 TYRO3Q06418 890 aa8□□□□□ -1.13
SOX6-215ENST00000533411 IRF5Q13568 498 aa8□□□□□ -1.13
SOX6-215ENST00000533411 PTPAQ15257 358 aa8□□□□□ -1.13
SOX6-215ENST00000533411 ZRSR1Q15695 479 aaKnown RBP8□□□□□ -1.13
SOX6-215ENST00000533411 STX1AQ16623 288 aa8□□□□□ -1.13
SOX6-215ENST00000533411 GPATCH4Q5T3I0 446 aaKnown RBP8□□□□□ -1.13
SOX6-215ENST00000533411 SASS6Q6UVJ0 657 aa8□□□□□ -1.13
SOX6-215ENST00000533411 RBM43Q6ZSC3 357 aaKnown RBP8□□□□□ -1.13
SOX6-215ENST00000533411 STAG2Q8N3U4 1231 aa8□□□□□ -1.13
SOX6-215ENST00000533411 DAGLBQ8NCG7 672 aa8□□□□□ -1.13
SOX6-215ENST00000533411 RNF214Q8ND24 703 aa8□□□□□ -1.13
SOX6-215ENST00000533411 GPKOWQ92917 476 aaPredicted RBP eCLIP8□□□□□ -1.13
SOX6-215ENST00000533411 TANGO6Q9C0B7 1094 aa8□□□□□ -1.13
SOX6-215ENST00000533411 GOLPH3LQ9H4A5 285 aa8□□□□□ -1.13
SOX6-215ENST00000533411 ARHGEF10LQ9HCE6 1279 aa8□□□□□ -1.13
SOX6-215ENST00000533411 RABGAP1Q9Y3P9 1069 aa8□□□□□ -1.13
SOX6-215ENST00000533411 MORC2Q9Y6X9 1032 aaPredicted RBP8□□□□□ -1.13
SOX6-215ENST00000533411 MKI67P46013 3256 aaKnown RBP8□□□□□ -1.13
SOX6-215ENST00000533411 CCDC194A0A1B0GVG4 234 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 STXBP3O00186 592 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 RAD21O60216 631 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 CAVIN2O95810 425 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 PFKFB1P16118 471 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 MARCKSP29966 332 aaPredicted RBP7.99□□□□□ -1.13
SOX6-215ENST00000533411 MAPK4P31152 587 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 NAPAP54920 295 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 CAMK4Q16566 473 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 CCL14Q16627 93 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 UVSSAQ2YD98 709 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 TTC38Q5R3I4 469 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 AXDND1Q5T1B0 1012 aaPredicted RBP7.99□□□□□ -1.13
SOX6-215ENST00000533411 WDR78Q5VTH9 848 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 WWC2Q6AWC2 1192 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 PPP1R18Q6NYC8 613 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 GPR142Q7Z601 462 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 PLEKHH3Q7Z736 793 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 HOMER1Q86YM7 354 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 CKAP2LQ8IYA6 745 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 BLIDQ8IZY5 108 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 FMR1NBQ8N0W7 255 aaPredicted RBP7.99□□□□□ -1.13
SOX6-215ENST00000533411 OXER1Q8TDS5 423 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 PXYLP1Q8TE99 480 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 GTF3C2Q8WUA4 911 aaPredicted RBP7.99□□□□□ -1.13
SOX6-215ENST00000533411 DCAF4Q8WV16 495 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 TRIB2Q92519 343 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 TNFRSF25Q93038 417 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 CCDC34Q96HJ3 373 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 FUCA2Q9BTY2 467 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 VCPKMTQ9H867 229 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 KANSL2Q9H9L4 492 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
SOX6-215ENST00000533411 BARHL2Q9NY43 387 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 FAM13BQ9NYF5 915 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 CLIP2Q9UDT6 1046 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 PCDHA4Q9UN74 947 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 TMX2Q9Y320 296 aa7.99□□□□□ -1.13
SOX6-215ENST00000533411 FRMPD2Q68DX3 1309 aaPredicted RBP7.99□□□□□ -1.13
SOX6-215ENST00000533411 A0A1B0GVL5 298 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 ESYT2A0FGR8 921 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 CYTH3O43739 400 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 FLOT1O75955 427 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 HMGCRP04035 888 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 GJB1P08034 283 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 GOLGA8HP0CJ92 632 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 SNHG28P0DPA3 235 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 ATP2B1P20020 1258 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 GNA11P29992 359 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 SYKP43405 635 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 NDUFA8P51970 172 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 ZNF543Q08ER8 600 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 NPY5RQ15761 445 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 MORN1Q5T089 497 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 RESP18Q5W5W9 173 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 LBX2Q6XYB7 198 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 PIK3AP1Q6ZUJ8 805 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 RASGRP2Q7LDG7 609 aa7.98□□□□□ -1.13
SOX6-215ENST00000533411 KRT25Q7Z3Z0 450 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms