RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ZNF365Q70YC5 407 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 EEPD1Q7L9B9 569 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 SLC43A3Q8NBI5 491 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 PBX4Q9BYU1 374 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 CYP39A1Q9NYL5 469 aa10.94□□□□□ -0.66
VPS26B-207ENST00000532160 IFIT3O14879 490 aaKnown RBP10.93□□□□□ -0.66
VPS26B-207ENST00000532160 TLR3O15455 904 aaKnown RBP10.93□□□□□ -0.66
VPS26B-207ENST00000532160 DYNC1LI2O43237 492 aaPredicted RBP10.93□□□□□ -0.66
VPS26B-207ENST00000532160 MCM5P33992 734 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 NOVP48745 357 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 CCDC96Q2M329 555 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 RCSD1Q6JBY9 416 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 TAPT1Q6NXT6 567 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 PSRC1Q6PGN9 363 aaPredicted RBP10.93□□□□□ -0.66
VPS26B-207ENST00000532160 BLOC1S2Q6QNY1 142 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 NSMFQ6X4W1 530 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 IQCA1Q86XH1 822 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 TMEM199Q8N511 208 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 ZSCAN10Q96SZ4 725 aaPredicted RBP10.93□□□□□ -0.66
VPS26B-207ENST00000532160 UBAC1Q9BSL1 405 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 PRDM6Q9NQX0 595 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 CXXC1Q9P0U4 656 aaPredicted RBP10.93□□□□□ -0.66
VPS26B-207ENST00000532160 CCPG1Q9ULG6 757 aa10.93□□□□□ -0.66
VPS26B-207ENST00000532160 ICAM1P05362 532 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 RPS6KB1P23443 525 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 SLC16A2P36021 539 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 RBM25P49756 843 aaKnown RBP10.92□□□□□ -0.66
VPS26B-207ENST00000532160 PSMC6P62333 389 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 EXOSC10Q01780 885 aaKnown RBP10.92□□□□□ -0.66
VPS26B-207ENST00000532160 ITGA7Q13683 1181 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 SEC23AQ15436 765 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 TMEM67Q5HYA8 995 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 DHX32Q7L7V1 743 aaKnown RBP10.92□□□□□ -0.66
VPS26B-207ENST00000532160 RAB11FIP4Q86YS3 637 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 ENAHQ8N8S7 591 aaPredicted RBP10.92□□□□□ -0.66
VPS26B-207ENST00000532160 SPDYE1Q8NFV5 336 aaPredicted RBP10.92□□□□□ -0.66
VPS26B-207ENST00000532160 DCAF4Q8WV16 495 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 TBC1D32Q96NH3 1257 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 KIF2CQ99661 725 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 TMEM47Q9BQJ4 181 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
VPS26B-207ENST00000532160 AP5M1Q9H0R1 490 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 TRPV6Q9H1D0 765 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 RANBP17Q9H2T7 1088 aaKnown RBP10.92□□□□□ -0.66
VPS26B-207ENST00000532160 HIPK3Q9H422 1215 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 ZSWIM6Q9HCJ5 1215 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 IL23AQ9NPF7 189 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 XIRP2A4UGR9 3374 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 SCN5AQ14524 2016 aa10.92□□□□□ -0.66
VPS26B-207ENST00000532160 FRMPD2Q68DX3 1309 aaPredicted RBP10.91□□□□□ -0.66
VPS26B-207ENST00000532160 NFIBO00712 420 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 SH2B2O14492 632 aaPredicted RBP10.91□□□□□ -0.66
VPS26B-207ENST00000532160 B4GALT4O60513 344 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 CABYRO75952 493 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 PSMA5P28066 241 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 CCL23P55773 120 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 ANAPC15P60006 121 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 BAATQ14032 418 aaPredicted RBP10.91□□□□□ -0.66
VPS26B-207ENST00000532160 WTAPQ15007 396 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 IQSEC1Q6DN90 963 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 Q6ZUG5 572 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 RUFY3Q7L099 469 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 IGDCC4Q8TDY8 1250 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 MORC4Q8TE76 937 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 HERVK_113Q902F9 699 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 VWCEQ96DN2 955 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 MYL10Q9BUA6 226 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 NOC4LQ9BVI4 516 aaKnown RBP10.91□□□□□ -0.66
VPS26B-207ENST00000532160 WNT8AQ9H1J5 351 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 PRDM12Q9H4Q4 367 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 VTA1Q9NP79 307 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 TCP11L1Q9NUJ3 509 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 CYP46A1Q9Y6A2 500 aa10.91□□□□□ -0.66
VPS26B-207ENST00000532160 SCN10AQ9Y5Y9 1956 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 TRANK1O15050 2925 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 ERICH2A1L162 156 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 ZEB2O60315 1214 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 ALDH5A1P51649 535 aaPredicted RBP10.9□□□□□ -0.66
VPS26B-207ENST00000532160 FGD1P98174 961 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 ADGRE1Q14246 886 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 IFIT1BQ5T764 474 aaKnown RBP10.9□□□□□ -0.66
VPS26B-207ENST00000532160 SYDE2Q5VT97 1194 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 BTNL9Q6UXG8 535 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 SLC30A10Q6XR72 485 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 NFXL1Q6ZNB6 911 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 OTOP2Q7RTS6 562 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 PPM1EQ8WY54 764 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 TM6SF1Q9BZW5 370 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 NKX2-4Q9H2Z4 354 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 LY9Q9HBG7 655 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 GPCPD1Q9NPB8 672 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 PDRG1Q9NUG6 133 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 YBX2Q9Y2T7 364 aaKnown RBP10.9□□□□□ -0.66
VPS26B-207ENST00000532160 Q9Y3F1 56 aa10.9□□□□□ -0.66
VPS26B-207ENST00000532160 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
VPS26B-207ENST00000532160 FGBP02675 491 aa10.89□□□□□ -0.67
VPS26B-207ENST00000532160 HMGB1P09429 215 aaKnown RBP10.89□□□□□ -0.67
VPS26B-207ENST00000532160 TOP1P11387 765 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms