RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 CIITAP33076 1130 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 IKQ13123 557 aaPredicted RBP13.81□□□□□ -0.2
CHD7-211ENST00000532149 NOLC1Q14978 699 aaKnown RBP eCLIP13.81□□□□□ -0.2
CHD7-211ENST00000532149 IL17AQ16552 155 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 Q4G0T1 1027 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 HYIQ5T013 277 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 USP49Q70CQ1 688 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 SV2BQ7L1I2 683 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 APOBEC3FQ8IUX4 373 aaKnown RBP13.81□□□□□ -0.2
CHD7-211ENST00000532149 RASGRP4Q8TDF6 673 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 IQCDQ96DY2 449 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 VEZTQ9HBM0 779 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
CHD7-211ENST00000532149 PCDHA12Q9UN75 941 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 ABCB11O95342 1321 aa13.81□□□□□ -0.2
CHD7-211ENST00000532149 LRRC10BA6NIK2 292 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 PSMA7O14818 248 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 WDR46O15213 610 aaKnown RBP13.8□□□□□ -0.2
CHD7-211ENST00000532149 ZNF18P17022 549 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 AFMP43652 599 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 TPD52L1Q16890 204 aaPredicted RBP13.8□□□□□ -0.2
CHD7-211ENST00000532149 TTBK2Q6IQ55 1244 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 FAM114A1Q8IWE2 563 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 LRRC8AQ8IWT6 810 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 PDGFDQ9GZP0 370 aaPredicted RBP13.8□□□□□ -0.2
CHD7-211ENST00000532149 TMEM60Q9H2L4 133 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 IFNKQ9P0W0 207 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 NFE2L3Q9Y4A8 694 aa13.8□□□□□ -0.2
CHD7-211ENST00000532149 A0A087X0B3 334 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.79□□□□□ -0.2
CHD7-211ENST00000532149 ZBTB7AO95365 584 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 GDF11O95390 407 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 TPM2P07951 284 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 SFPQP23246 707 aaKnown RBP eCLIP13.79□□□□□ -0.2
CHD7-211ENST00000532149 SREBF1P36956 1147 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 PAK1Q13153 545 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 CUL4BQ13620 913 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 TRIM14Q14142 442 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 NOM1Q5C9Z4 860 aaKnown RBP13.79□□□□□ -0.2
CHD7-211ENST00000532149 FCHSD1Q86WN1 690 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 MCF2L2Q86YR7 1114 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 SPC24Q8NBT2 197 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 ZFP91Q96JP5 570 aaPredicted RBP13.79□□□□□ -0.2
CHD7-211ENST00000532149 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 XPO4Q9C0E2 1151 aaKnown RBP13.79□□□□□ -0.2
CHD7-211ENST00000532149 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
CHD7-211ENST00000532149 AS3MTQ9HBK9 375 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 PGAP2Q9UHJ9 254 aa13.79□□□□□ -0.2
CHD7-211ENST00000532149 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 NFKBIEO00221 500 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 WNT7AO00755 349 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 TPM1P09493 284 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 BMP6P22004 513 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 EEF1GP26641 437 aaKnown RBP13.78□□□□□ -0.2
CHD7-211ENST00000532149 LMOD1P29536 600 aaPredicted RBP13.78□□□□□ -0.2
CHD7-211ENST00000532149 SLC16A2P36021 539 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 TECP42680 631 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 TXKP42681 527 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 KRT26Q7Z3Y9 468 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 PRPF38AQ8NAV1 312 aaKnown RBP13.78□□□□□ -0.2
CHD7-211ENST00000532149 GIMAP8Q8ND71 665 aaPredicted RBP13.78□□□□□ -0.2
CHD7-211ENST00000532149 CRYGNQ8WXF5 182 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 ERCC4Q92889 916 aaPredicted RBP13.78□□□□□ -0.2
CHD7-211ENST00000532149 ANO3Q9BYT9 981 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 CPVLQ9H3G5 476 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 TTC12Q9H892 705 aaPredicted RBP13.78□□□□□ -0.2
CHD7-211ENST00000532149 FANCLQ9NW38 375 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 PRR12Q9ULL5 1215 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 PCDHAC2Q9Y5I4 1007 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
CHD7-211ENST00000532149 PPP1R3GB7ZBB8 358 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 GCOM1H8Y6P7 765 aaPredicted RBP13.77□□□□□ -0.21
CHD7-211ENST00000532149 MEIS2O14770 477 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 RAD21O60216 631 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 PPP1R11O60927 126 aaPredicted RBP13.77□□□□□ -0.21
CHD7-211ENST00000532149 POLR2MP0CAP2 368 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 ARHGAP4P98171 946 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 GHRHRQ02643 423 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 RASA3Q14644 834 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 KARSQ15046 597 aaKnown RBP13.77□□□□□ -0.21
CHD7-211ENST00000532149 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 SPECC1LQ69YQ0 1117 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 VSTM4Q8IW00 320 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 CCDC51Q96ER9 411 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 WDR18Q9BV38 432 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
CHD7-211ENST00000532149 ZNF341Q9BYN7 854 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 THAP9Q9H5L6 903 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 KCNMB3Q9NPA1 279 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 EXOC1Q9NV70 894 aa13.77□□□□□ -0.21
CHD7-211ENST00000532149 ITIH6Q6UXX5 1313 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 PITPNM2Q9BZ72 1349 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 A0A1B0GTH6 734 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 GOLGA6L9A6NEM1 432 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 FOXN1O15353 648 aa13.76□□□□□ -0.21
CHD7-211ENST00000532149 HOXB3P14651 431 aaPredicted RBP13.76□□□□□ -0.21
CHD7-211ENST00000532149 PLCG1P19174 1290 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms