RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 GPAT2Q6NUI2 795 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 PAXIP1Q6ZW49 1069 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 CCDC150Q8NCX0 1101 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 BRI3BPQ8WY22 251 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 ASCC2Q9H1I8 757 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 C6orf50Q9HD87 102 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 PCDHA1Q9Y5I3 950 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 ABCB11O95342 1321 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 FAM155AB1AL88 458 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 STXBP3O00186 592 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 MMP1P03956 469 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 NLRP5P59047 1200 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 FAM193AP78312 1265 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 TKFCQ3LXA3 575 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 KRT40Q6A162 431 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 ADALQ6DHV7 355 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 MCTP2Q6DN12 878 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 SAMD1Q6SPF0 538 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 SAMD3Q8N6K7 520 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 AOPEPQ8N6M6 819 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 ZMYND12Q9H0C1 365 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 VPS54Q9P1Q0 977 aa16.5■□□□□ 0.23
NR1H3-231ENST00000529540 ZNF215Q9UL58 517 aaPredicted RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 MRPL11Q9Y3B7 192 aaKnown RBP16.5■□□□□ 0.23
NR1H3-231ENST00000529540 hCG_1642624A0A1W2PR95 340 aa16.49■□□□□ 0.23
NR1H3-231ENST00000529540 BTBD19C9JJ37 291 aa16.49■□□□□ 0.23
NR1H3-231ENST00000529540 PDHXO00330 501 aa16.49■□□□□ 0.23
NR1H3-231ENST00000529540 SLU7O95391 586 aaKnown RBP16.49■□□□□ 0.23
NR1H3-231ENST00000529540 GCLCP48506 637 aaPredicted RBP16.49■□□□□ 0.23
NR1H3-231ENST00000529540 HERVK_113P62684 666 aa16.49■□□□□ 0.23
NR1H3-231ENST00000529540 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
NR1H3-231ENST00000529540 GNL2Q13823 731 aaKnown RBP16.49■□□□□ 0.23
NR1H3-231ENST00000529540 NAA30Q147X3 362 aaPredicted RBP16.49■□□□□ 0.23
NR1H3-231ENST00000529540 SMCR8Q8TEV9 937 aaPredicted RBP16.49■□□□□ 0.23
NR1H3-231ENST00000529540 PHF20Q9BVI0 1012 aa16.49■□□□□ 0.23
NR1H3-231ENST00000529540 TEX13BQ9BXU2 312 aa16.49■□□□□ 0.23
NR1H3-231ENST00000529540 FTOQ9C0B1 505 aaKnown RBP eCLIP16.49■□□□□ 0.23
NR1H3-231ENST00000529540 CCPG1Q9ULG6 757 aa16.49■□□□□ 0.23
NR1H3-231ENST00000529540 PARP14Q460N5 1801 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 YEATS4O95619 227 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 MRPL12P52815 198 aaKnown RBP16.48■□□□□ 0.23
NR1H3-231ENST00000529540 KRT222Q8N1A0 295 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 DAGLBQ8NCG7 672 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 ZNF592Q92610 1267 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 GPKOWQ92917 476 aaPredicted RBP eCLIP16.48■□□□□ 0.23
NR1H3-231ENST00000529540 CUL5Q93034 780 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 AIFM3Q96NN9 605 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 FOXP1Q9H334 677 aaPredicted RBP16.48■□□□□ 0.23
NR1H3-231ENST00000529540 L2HGDHQ9H9P8 463 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 PCDHA7Q9UN72 937 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 RABGAP1Q9Y3P9 1069 aa16.48■□□□□ 0.23
NR1H3-231ENST00000529540 KRT2P35908 639 aa16.47■□□□□ 0.23
NR1H3-231ENST00000529540 ME1P48163 572 aa16.47■□□□□ 0.23
NR1H3-231ENST00000529540 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
NR1H3-231ENST00000529540 CCDC174Q6PII3 467 aa16.47■□□□□ 0.23
NR1H3-231ENST00000529540 MCF2L2Q86YR7 1114 aa16.47■□□□□ 0.23
NR1H3-231ENST00000529540 CREBRFQ8IUR6 639 aa16.47■□□□□ 0.23
NR1H3-231ENST00000529540 MAP3K20Q9NYL2 800 aaKnown RBP16.47■□□□□ 0.23
NR1H3-231ENST00000529540 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
NR1H3-231ENST00000529540 SMCO2A6NFE2 343 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 TM4SF4P48230 202 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 ADCY7P51828 1080 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 BRAPQ7Z569 592 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 FILIP1Q7Z7B0 1213 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 REPS2Q8NFH8 660 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 CAPNS2Q96L46 248 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 P2RX7Q99572 595 aaKnown RBP16.46■□□□□ 0.23
NR1H3-231ENST00000529540 POLR3EQ9NVU0 708 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 A0A0G2JMZ2 1700 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 ZNF536O15090 1300 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 PPP1R11O60927 126 aaPredicted RBP16.46■□□□□ 0.23
NR1H3-231ENST00000529540 SLC25A27O95847 323 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 CCNA1P78396 465 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 USH1GQ495M9 461 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 IFNL1Q8IU54 200 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 DIS3L2Q8IYB7 885 aaKnown RBP16.46■□□□□ 0.23
NR1H3-231ENST00000529540 CPXCR1Q8N123 301 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 LINC00301Q8NCQ3 95 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 COA7Q96BR5 231 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 PSTPIP2Q9H939 334 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 RIC8AQ9NPQ8 531 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 KIAA1468Q9P260 1216 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 FBXO40Q9UH90 709 aa16.46■□□□□ 0.23
NR1H3-231ENST00000529540 ZNF214Q9UL59 606 aaPredicted RBP16.46■□□□□ 0.23
NR1H3-231ENST00000529540 RLFQ13129 1914 aa16.46■□□□□ 0.22
NR1H3-231ENST00000529540 MAP2K2P36507 400 aa16.45■□□□□ 0.22
NR1H3-231ENST00000529540 STAT3P40763 770 aa16.45■□□□□ 0.22
NR1H3-231ENST00000529540 NLRP12P59046 1061 aa16.45■□□□□ 0.22
NR1H3-231ENST00000529540 TPM4P67936 248 aa16.45■□□□□ 0.22
NR1H3-231ENST00000529540 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
NR1H3-231ENST00000529540 CYP4F22Q6NT55 531 aa16.45■□□□□ 0.22
NR1H3-231ENST00000529540 BLIDQ8IZY5 108 aa16.45■□□□□ 0.22
NR1H3-231ENST00000529540 CHST13Q8NET6 341 aa16.45■□□□□ 0.22
NR1H3-231ENST00000529540 RAVER2Q9HCJ3 691 aaKnown RBP16.45■□□□□ 0.22
NR1H3-231ENST00000529540 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms