RNA–Protein interactions for RNA: ENST00000526942.5

RPUSD4-203, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 5

Gene RPUSD4, Length 1,791 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-203ENST00000526942 RNF113AO15541 343 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 CPT1AP50416 773 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 TFAP4Q01664 338 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 PDE4BQ07343 736 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 GRB10Q13322 594 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 KCTD1Q719H9 257 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 IFNL3Q8IZI9 196 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 MTG1Q9BT17 334 aaPredicted RBP13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 C11orf16Q9NQ32 467 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 ECHDC1Q9NTX5 307 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 CCPG1Q9ULG6 757 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 PRR12Q9ULL5 1215 aa13.68□□□□□ -0.22
RPUSD4-203ENST00000526942 COL4A4P53420 1690 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 PITPNM1O00562 1244 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 GPR37L1O60883 481 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 IQCF3P0C7M6 154 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 ALDH5A1P51649 535 aaPredicted RBP13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 NBPF20Q3BBV1 942 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 RASGRP2Q7LDG7 609 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 WDR11Q9BZH6 1224 aa13.67□□□□□ -0.22
RPUSD4-203ENST00000526942 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 LPXNO60711 386 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 ZFYP08048 801 aaPredicted RBP13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 RCSD1Q6JBY9 416 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 RETREG2Q8NC44 543 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 FTOQ9C0B1 505 aaKnown RBP eCLIP13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 OSBPL3Q9H4L5 887 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 GPHNQ9NQX3 736 aaPredicted RBP13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 ADD3Q9UEY8 706 aaKnown RBP13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 SCN10AQ9Y5Y9 1956 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 RBM47A0AV96 593 aaKnown RBP13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 FAM86C2PA6NEL3 165 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 DDX11L8A8MPP1 907 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 K7ELQ4 463 aaPredicted RBP13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 ICAM1P05362 532 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 NFRKBQ6P4R8 1299 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 STX8Q9UNK0 236 aa13.66□□□□□ -0.22
RPUSD4-203ENST00000526942 LOC102724159A0A0B4J2E5 919 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 BAIAP3O94812 1187 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 HSP90AA1P07900 732 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 SLC3A2P08195 630 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 MRE11P49959 708 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 PPARAQ07869 468 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 BFSP2Q13515 415 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 BAATQ14032 418 aaPredicted RBP13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 PWP2Q15269 919 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 RABEP1Q15276 862 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 NACAP1Q9BZK3 213 aa13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
RPUSD4-203ENST00000526942 NFIBO00712 420 aa13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 PTPN11Q06124 597 aaPredicted RBP13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 BRDTQ58F21 947 aaPredicted RBP13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 NAP1L5Q96NT1 182 aaPredicted RBP13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 NAPBQ9H115 298 aa13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 RAD50Q92878 1312 aa13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 PTPRSQ13332 1948 aa13.64□□□□□ -0.23
RPUSD4-203ENST00000526942 LCHNA4D1U4 455 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 NKRFO15226 690 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 KCNJ6P48051 423 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 HSP90AA2PQ14568 343 aaPredicted RBP13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 PPP2R5BQ15173 497 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 GPATCH3Q96I76 525 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 USP26Q9BXU7 913 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 IL17RBQ9NRM6 502 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 MTMR7Q9Y216 660 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 PTPDC1A2A3K4 754 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 A6NJR5 290 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 TSPY2A6NKD2 308 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 PI4K2BG5E9Z4 385 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 NMT2O60551 498 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 KPNA6O60684 536 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 SDSP20132 328 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 WDR5P61964 334 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 CCDC96Q2M329 555 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 LRRFIP1Q32MZ4 808 aaKnown RBP13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 SLC30A10Q6XR72 485 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 OTUD7AQ8TE49 926 aaPredicted RBP13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 LMCD1Q9NZU5 365 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 NOD1Q9Y239 953 aa13.63□□□□□ -0.23
RPUSD4-203ENST00000526942 TET1Q8NFU7 2136 aa13.62□□□□□ -0.23
RPUSD4-203ENST00000526942 CD2BP2O95400 341 aaKnown RBP13.62□□□□□ -0.23
RPUSD4-203ENST00000526942 TTBK2Q6IQ55 1244 aa13.62□□□□□ -0.23
RPUSD4-203ENST00000526942 TMCO2Q7Z6W1 182 aaPredicted RBP13.62□□□□□ -0.23
RPUSD4-203ENST00000526942 DCAF4Q8WV16 495 aa13.62□□□□□ -0.23
RPUSD4-203ENST00000526942 COPS5Q92905 334 aa13.62□□□□□ -0.23
RPUSD4-203ENST00000526942 SALL3Q9BXA9 1300 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms