RNA–Protein interactions for RNA: ENST00000524509.1

PACSIN3-202, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-202ENST00000524509 LARP6Q9BRS8 491 aaKnown RBP20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 LLPHQ9BRT6 129 aaKnown RBP20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 SLC26A6Q9BXS9 759 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 NCOA5Q9HCD5 579 aaKnown RBP20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 BARHL2Q9NY43 387 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 NRBP1Q9UHY1 535 aa20.23■□□□□ 0.83
PACSIN3-202ENST00000524509 NFIBO00712 420 aa20.22■□□□□ 0.83
PACSIN3-202ENST00000524509 GHRHRQ02643 423 aa20.22■□□□□ 0.83
PACSIN3-202ENST00000524509 CACNB2Q08289 660 aaPredicted RBP20.22■□□□□ 0.83
PACSIN3-202ENST00000524509 LRRC26Q2I0M4 334 aa20.22■□□□□ 0.83
PACSIN3-202ENST00000524509 LHX8Q68G74 356 aa20.22■□□□□ 0.83
PACSIN3-202ENST00000524509 NOL8Q76FK4 1167 aaKnown RBP20.22■□□□□ 0.83
PACSIN3-202ENST00000524509 SH3GLB2Q9NR46 395 aa20.22■□□□□ 0.83
PACSIN3-202ENST00000524509 PPP1R11O60927 126 aaPredicted RBP20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 GNA11P29992 359 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 NAPAP54920 295 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 RPS6P62753 249 aaKnown RBP20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 BAATQ14032 418 aaPredicted RBP20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 FAM133AQ8N9E0 248 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 BICD2Q8TD16 824 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 MAML3Q96JK9 1138 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 PSTPIP2Q9H939 334 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 KIF3AQ9Y496 699 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 SYNGAP1Q96PV0 1343 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 STK36Q9NRP7 1315 aa20.21■□□□□ 0.83
PACSIN3-202ENST00000524509 PIK3CDO00329 1044 aa20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 COBLO75128 1261 aa20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 CFBP00751 764 aa20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 PGK2P07205 417 aa20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 HMGN5P82970 282 aaKnown RBP20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 MDM2Q00987 491 aaPredicted RBP20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 PHKBQ93100 1093 aa20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 GUCD1Q96NT3 240 aa20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 EHMT1Q9H9B1 1298 aa20.2■□□□□ 0.82
PACSIN3-202ENST00000524509 CALML3P27482 149 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 HSD17B4P51659 736 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 GALNT17Q6IS24 598 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 MAMDC4Q6UXC1 1216 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 NSUN6Q8TEA1 469 aaKnown RBP20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 IWS1Q96ST2 819 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 TINF2Q9BSI4 451 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 C6orf50Q9HD87 102 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 CNPY2Q9Y2B0 182 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 VCANP13611 3396 aa20.19■□□□□ 0.82
PACSIN3-202ENST00000524509 ZNF236Q9UL36 1845 aa20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 ESYT2A0FGR8 921 aa20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 CCND3P30281 292 aaPredicted RBP20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 WWC2Q6AWC2 1192 aa20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 SMARCC2Q8TAQ2 1214 aa20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 NPLOC4Q8TAT6 608 aa20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 COL11A1P12107 1806 aaPredicted RBP20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 EYSQ5T1H1 3165 aa20.18■□□□□ 0.82
PACSIN3-202ENST00000524509 hCG_1642624A0A1W2PR95 340 aa20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 FOSP01100 380 aaPredicted RBP20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 ADCY7P51828 1080 aa20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 CCL14Q16627 93 aa20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 NECAB1Q8N987 351 aa20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 SYTL5Q8TDW5 730 aaPredicted RBP20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 RIC8AQ9NPQ8 531 aa20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 FRMPD3Q5JV73 1810 aa20.17■□□□□ 0.82
PACSIN3-202ENST00000524509 SMCO2A6NFE2 343 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 SPDYE3A6NKU9 549 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 STXBP3O00186 592 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 MSCO60682 206 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 PKN1Q16512 942 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 ARHGEF16Q5VV41 709 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 GPKOWQ92917 476 aaPredicted RBP eCLIP20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 RMDN3Q96TC7 470 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 LBHD1Q9BQE6 289 aaPredicted RBP20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 ZMYND12Q9H0C1 365 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 ABHD16BQ9H3Z7 469 aa20.16■□□□□ 0.82
PACSIN3-202ENST00000524509 ALDH5A1P51649 535 aaPredicted RBP20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 CNTN2Q02246 1040 aa20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 TRIM29Q14134 588 aa20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 XRRA1Q6P2D8 792 aa20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 SLC30A10Q6XR72 485 aa20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 CCDC83Q8IWF9 413 aa20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 SNX21Q969T3 373 aa20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 TMX3Q96JJ7 454 aa20.15■□□□□ 0.82
PACSIN3-202ENST00000524509 STAM2O75886 525 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 NLRP5P59047 1200 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 PDE4DQ08499 809 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 AP3B2Q13367 1082 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 ZNF697Q5TEC3 545 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 FAM184AQ8NB25 1140 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 NSUN7Q8NE18 718 aaKnown RBP20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 MORC4Q8TE76 937 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 BRMS1Q9HCU9 246 aa20.14■□□□□ 0.81
PACSIN3-202ENST00000524509 SOWAHBA6NEL2 793 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 OPLAHO14841 1288 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 LARGE1O95461 756 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 IGHA2P01877 340 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 STXBP2Q15833 593 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 ARMCX2Q7L311 632 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 HSCBQ8IWL3 235 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 FAM161BQ96MY7 647 aa20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 SENP6Q9GZR1 1112 aaPredicted RBP20.13■□□□□ 0.81
PACSIN3-202ENST00000524509 VTA1Q9NP79 307 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms