RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 RASA1P20936 1047 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 KCNA5P22460 613 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 SNAP25P60880 206 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 PURAQ00577 322 aaKnown RBP6.89□□□□□ -1.31
KDM3B-205ENST00000508386 NBPF20Q3BBV1 942 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 TMED8Q6PL24 325 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-205ENST00000508386 NOL8Q76FK4 1167 aaKnown RBP6.89□□□□□ -1.31
KDM3B-205ENST00000508386 AACSQ86V21 672 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 FBXO16Q8IX29 292 aaPredicted RBP6.89□□□□□ -1.31
KDM3B-205ENST00000508386 CHST13Q8NET6 341 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 PRSS33Q8NF86 280 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 NEK9Q8TD19 979 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.89□□□□□ -1.31
KDM3B-205ENST00000508386 SLC9A7Q96T83 725 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 GOPCQ9HD26 462 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 HOMER2Q9NSB8 354 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 MTUS1Q9ULD2 1270 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 EXOC6BQ9Y2D4 811 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 LCTP09848 1927 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 SCN10AQ9Y5Y9 1956 aa6.89□□□□□ -1.31
KDM3B-205ENST00000508386 DNAH14Q0VDD8 3507 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 MYH8P13535 1937 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 LINC01553A4QN01 128 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 H3BQ06 376 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-205ENST00000508386 ZBED4O75132 1171 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 PFKMP08237 780 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 RLBP1P12271 317 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 ADD2P35612 726 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 ERVK-21P61565 698 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 WDR5P61964 334 aaKnown RBP6.88□□□□□ -1.31
KDM3B-205ENST00000508386 MUM1L1Q5H9M0 696 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 IQSEC1Q6DN90 963 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 PTCRAQ6ISU1 281 aaPredicted RBP6.88□□□□□ -1.31
KDM3B-205ENST00000508386 RASGRP2Q7LDG7 609 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 STK11IPQ8N1F8 1099 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 DHX38Q92620 1227 aaKnown RBP6.88□□□□□ -1.31
KDM3B-205ENST00000508386 MKL1Q969V6 931 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 CHMP4CQ96CF2 233 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 PUS7LQ9H0K6 701 aaKnown RBP6.88□□□□□ -1.31
KDM3B-205ENST00000508386 AP5M1Q9H0R1 490 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 IL1RAPL2Q9NP60 686 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 ATP8A2Q9NTI2 1148 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 LMCD1Q9NZU5 365 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 NYAP2Q9P242 653 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 CLIP2Q9UDT6 1046 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 Q9Y3F1 56 aa6.88□□□□□ -1.31
KDM3B-205ENST00000508386 FAM186AA6NE01 2351 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 ARHGAP33O14559 1287 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 DCXO43602 365 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 NBNO60934 754 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 ALADP13716 330 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 SSTR3P32745 418 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-205ENST00000508386 LTBRP36941 435 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 ZP2Q05996 745 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 TCF15Q12870 199 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 COL19A1Q14993 1142 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 DUSP28Q4G0W2 176 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 C6orf132Q5T0Z8 1188 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 TRAF7Q6Q0C0 670 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 KIAA1211Q6ZU35 1233 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 LRRC47Q8N1G4 583 aaKnown RBP6.87□□□□□ -1.31
KDM3B-205ENST00000508386 FRAT1Q92837 279 aaPredicted RBP6.87□□□□□ -1.31
KDM3B-205ENST00000508386 COPS5Q92905 334 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 CEP95Q96GE4 821 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 KCNK17Q96T54 332 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 DNAJC2Q99543 621 aaKnown RBP6.87□□□□□ -1.31
KDM3B-205ENST00000508386 C17orf80Q9BSJ5 609 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 SEZ6LQ9BYH1 1024 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 FTOQ9C0B1 505 aaKnown RBP eCLIP6.87□□□□□ -1.31
KDM3B-205ENST00000508386 CYP39A1Q9NYL5 469 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 FBXO40Q9UH90 709 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 GVINP1Q7Z2Y8 2422 aa6.87□□□□□ -1.31
KDM3B-205ENST00000508386 RBM47A0AV96 593 aaKnown RBP6.86□□□□□ -1.31
KDM3B-205ENST00000508386 ASB14A6NK59 587 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 GSG1L2A8MUP6 293 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 ZEB2O60315 1214 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 PRDM1O75626 825 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 GJB5O95377 273 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 CXCL10P02778 98 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 MYL3P08590 195 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 SUPT20HL2P0C7V6 817 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 ACTN1P12814 892 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 RFC2P35250 354 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 IRS1P35568 1242 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 OAZ1P54368 228 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 MBTPS1Q14703 1052 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 TTF1Q15361 905 aaPredicted RBP6.86□□□□□ -1.31
KDM3B-205ENST00000508386 FAM117BQ6P1L5 589 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 CEP85Q6P2H3 762 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.86□□□□□ -1.31
KDM3B-205ENST00000508386 WNT8BQ93098 351 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 TRERF1Q96PN7 1200 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 STRBPQ96SI9 672 aaKnown RBP6.86□□□□□ -1.31
KDM3B-205ENST00000508386 MTG1Q9BT17 334 aaPredicted RBP6.86□□□□□ -1.31
KDM3B-205ENST00000508386 OSBPL7Q9BZF2 842 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 KCNH6Q9H252 994 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 ACAD9Q9H845 621 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 RNF146Q9NTX7 359 aa6.86□□□□□ -1.31
KDM3B-205ENST00000508386 MTMR4Q9NYA4 1195 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms