RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 SENP6Q9GZR1 1112 aaPredicted RBP25.34■■□□□ 1.65
UBE2D3-214ENST00000503282 PXMP2Q9NR77 195 aa25.34■■□□□ 1.65
UBE2D3-214ENST00000503282 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 ADCY6O43306 1168 aa25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 COL6A1P12109 1028 aa25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 EIF2AK2P19525 551 aaKnown RBP25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 CCT2P78371 535 aaKnown RBP25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 STXBP2Q15833 593 aa25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 SMARCC2Q8TAQ2 1214 aa25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 IL17RAQ96F46 866 aa25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 LARP6Q9BRS8 491 aaKnown RBP25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 PSTPIP2Q9H939 334 aa25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 GTF3C3Q9Y5Q9 886 aa25.33■■□□□ 1.65
UBE2D3-214ENST00000503282 SYNRGQ9UMZ2 1314 aa25.33■■□□□ 1.64
UBE2D3-214ENST00000503282 NID2Q14112 1375 aa25.32■■□□□ 1.64
UBE2D3-214ENST00000503282 GPKOWQ92917 476 aaPredicted RBP eCLIP25.32■■□□□ 1.64
UBE2D3-214ENST00000503282 ALDH8A1Q9H2A2 487 aaPredicted RBP25.32■■□□□ 1.64
UBE2D3-214ENST00000503282 ADAMTS4O75173 837 aa25.31■■□□□ 1.64
UBE2D3-214ENST00000503282 NR3C2P08235 984 aa25.31■■□□□ 1.64
UBE2D3-214ENST00000503282 C6orf222P0C671 652 aaPredicted RBP25.31■■□□□ 1.64
UBE2D3-214ENST00000503282 SMPD1P17405 629 aa25.31■■□□□ 1.64
UBE2D3-214ENST00000503282 ANKRD1Q15327 319 aa25.31■■□□□ 1.64
UBE2D3-214ENST00000503282 WDR11Q9BZH6 1224 aa25.31■■□□□ 1.64
UBE2D3-214ENST00000503282 AP5M1Q9H0R1 490 aa25.31■■□□□ 1.64
UBE2D3-214ENST00000503282 RBM47A0AV96 593 aaKnown RBP25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 hCG_1984214I3L0E3 225 aa25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 PIK3CDO00329 1044 aa25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 GJA9P57773 515 aa25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 AKAP17AQ02040 695 aaKnown RBP25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 WWC2Q6AWC2 1192 aa25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 USP17L6PQ6QN14 398 aa25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 ZNF713Q8N859 430 aaPredicted RBP25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 SCFD2Q8WU76 684 aa25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 PDCD2LQ9BRP1 358 aa25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 RBM27Q9P2N5 1060 aaKnown RBP25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 GNEQ9Y223 722 aaKnown RBP25.3■■□□□ 1.64
UBE2D3-214ENST00000503282 MEIS2O14770 477 aa25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 DYNC1LI2O43237 492 aaPredicted RBP25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 EVI5O60447 810 aa25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 EIF3JO75822 258 aaKnown RBP25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 MYCLP12524 364 aaPredicted RBP25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 NAPAP54920 295 aa25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 STK3Q13188 491 aa25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 TSEN34Q9BSV6 310 aaKnown RBP25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 UPF3AQ9H1J1 476 aaKnown RBP25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 NCOA5Q9HCD5 579 aaKnown RBP25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 Q9Y3F1 56 aa25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 LRRC37A2A6NM11 1700 aa25.29■■□□□ 1.64
UBE2D3-214ENST00000503282 CPLX1O14810 134 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 PRPF3O43395 683 aaKnown RBP25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 IFNAR1P17181 557 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 NEK4P51957 841 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 PGM5Q15124 567 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 NTRK3Q16288 839 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 DUSP28Q4G0W2 176 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 GNASQ5JWF2 1037 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 SEPT14Q6ZU15 432 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 TLK2Q86UE8 772 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 PCSK9Q8NBP7 692 aaKnown RBP25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 KLHDC9Q8NEP7 349 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 PHKBQ93100 1093 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 FERMT2Q96AC1 680 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 BARHL2Q9NY43 387 aa25.28■■□□□ 1.64
UBE2D3-214ENST00000503282 TXNP10599 105 aaKnown RBP25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 CST5P28325 142 aaPredicted RBP25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 CCND2P30279 289 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 AK2P54819 239 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 TTLL4Q14679 1199 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 KCNA10Q16322 511 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 PFKFB3Q16875 520 aaPredicted RBP25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 TMEM63BQ5T3F8 832 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 PPP1R18Q6NYC8 613 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 VSIG10LQ86VR7 867 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 SLC26A6Q9BXS9 759 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 PHF24Q9UPV7 400 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 NR2E3Q9Y5X4 410 aa25.27■■□□□ 1.64
UBE2D3-214ENST00000503282 STXBP3O00186 592 aa25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 NKRFO15226 690 aaKnown RBP eCLIP25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 SCG2P13521 617 aa25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 ATN1P54259 1190 aaPredicted RBP25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 CPLX2Q6PUV4 134 aaKnown RBP25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 RNF26Q9BY78 433 aaPredicted RBP25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 C22orf23Q9BZE7 217 aa25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 SLKQ9H2G2 1235 aaPredicted RBP25.26■■□□□ 1.63
UBE2D3-214ENST00000503282 MYADML2A6NDP7 307 aa25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 SMCO2A6NFE2 343 aa25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 MOXD2PA6NHM9 499 aa25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 ACLYP53396 1101 aa25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 NKX3-2P78367 333 aa25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 IRX5P78411 483 aaPredicted RBP25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 CCSAPQ6IQ19 270 aaPredicted RBP25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 TRIM22Q8IYM9 498 aa25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 UPF2Q9HAU5 1272 aaKnown RBP25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 TPCN1Q9ULQ1 816 aa25.25■■□□□ 1.63
UBE2D3-214ENST00000503282 SPDYE3A6NKU9 549 aa25.24■■□□□ 1.63
UBE2D3-214ENST00000503282 ZEB2O60315 1214 aa25.24■■□□□ 1.63
UBE2D3-214ENST00000503282 PPFIA3O75145 1194 aa25.24■■□□□ 1.63
UBE2D3-214ENST00000503282 BEX3Q00994 111 aa25.24■■□□□ 1.63
UBE2D3-214ENST00000503282 SSRP1Q08945 709 aaKnown RBP25.24■■□□□ 1.63
UBE2D3-214ENST00000503282 FSCN1Q16658 493 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms