RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TRIM37O94972 964 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 SLC20A2Q08357 652 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 FAM47AQ5JRC9 791 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 C10orf76Q5T2E6 689 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 ARL6IP4Q66PJ3 421 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 EIF3HO15372 352 aaKnown RBP eCLIP18.84■□□□□ 0.612e-6■■■■■ 28.7
HMGXB3-201ENST00000502717 PRR29P0C7W0 189 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 CTSWP56202 376 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 KCNB2Q92953 911 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 TSNARE1Q96NA8 513 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 ARPP21Q9UBL0 812 aaPredicted RBP18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 HDAC6Q9UBN7 1215 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 HOXA7P31268 230 aaPredicted RBP18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 FERMT1Q9BQL6 677 aa18.84■□□□□ 0.61
HMGXB3-201ENST00000502717 NDC80O14777 642 aa18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 ABCB4P21439 1286 aa18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 FAM26FQ5R3K3 315 aa18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 TRMT1LQ7Z2T5 733 aaKnown RBP18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 KIAA1210Q9ULL0 1709 aa18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 KIDINS220Q9ULH0 1771 aa18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 PTPROQ16827 1216 aa18.83■□□□□ 0.61
HMGXB3-201ENST00000502717 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 EVI5O60447 810 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 SERPING1P05155 500 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 GBP7Q8N8V2 638 aaPredicted RBP18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 TRIM4Q9C037 500 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 METTL14Q9HCE5 456 aaKnown RBP18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 PTPRMP28827 1452 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 KIF28PB7ZC32 967 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 NR1I3Q14994 352 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 FAM133BQ5BKY9 247 aaKnown RBP18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 CCDC13Q8IYE1 715 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 LARGE2Q8N3Y3 721 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 UHMK1Q8TAS1 419 aaKnown RBP18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 NDST4Q9H3R1 872 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 LARSQ9P2J5 1176 aaKnown RBP18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 HPCAL4Q9UM19 191 aa18.83■□□□□ 0.6
HMGXB3-201ENST00000502717 PDE8BO95263 885 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 ATP1A1P05023 1023 aaKnown RBP18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 PARP9Q8IXQ6 854 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 TYW1Q9NV66 732 aaKnown RBP18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 USP31Q70CQ4 1352 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 STOX1Q6ZVD7 989 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 MIPOL1Q8TD10 442 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 DLC1Q96QB1 1528 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 PANK4Q9NVE7 773 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 WDR17Q8IZU2 1322 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 PASKQ96RG2 1323 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 CCDC188H7C350 402 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 KIF3CO14782 793 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 ADAM9Q13443 819 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 BEND6Q5SZJ8 279 aaPredicted RBP18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 GEMIN8Q9NWZ8 242 aaKnown RBP18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 CDC42BPGQ6DT37 1551 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 TTC26A0AVF1 554 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 FKBP3Q00688 224 aaKnown RBP18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 TAF11Q15544 211 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 UAP1Q16222 522 aaPredicted RBP18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 NEK9Q8TD19 979 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 SDR42E1Q8WUS8 393 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 ATP6V1G3Q96LB4 118 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 OSBPL9Q96SU4 736 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 ZNF408Q9H9D4 720 aa18.82■□□□□ 0.6
HMGXB3-201ENST00000502717 A0A1W2PQC6 194 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 CCNI2Q6ZMN8 369 aaPredicted RBP18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 CRB1P82279 1406 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 ITIH6Q6UXX5 1313 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 GRK7Q8WTQ7 553 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 MRRFQ96E11 262 aaKnown RBP18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 SAAL1Q96ER3 474 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 PCDHA4Q9UN74 947 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 HIBADHP31937 336 aaKnown RBP18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 PHKA1P46020 1223 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 ACTN3Q08043 901 aaPredicted RBP18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 MAP7Q14244 749 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 SH2D4BQ5SQS7 431 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 FBXW10Q5XX13 1052 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 IMPG2Q9BZV3 1241 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 SYNCQ9H7C4 482 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 GDAQ9Y2T3 454 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 FOXN1O15353 648 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 IRAK1P51617 712 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 MRPS25P82663 173 aaKnown RBP18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 NAA35Q5VZE5 725 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 TBC1D1Q86TI0 1168 aaPredicted RBP18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 PNMA1Q8ND90 353 aa18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 GPKOWQ92917 476 aaPredicted RBP eCLIP18.81■□□□□ 0.6
HMGXB3-201ENST00000502717 IGKV5-2P06315 115 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 IL9RQ01113 521 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 MMS19Q96T76 1030 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 FMO2Q99518 471 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 PPP1R37O75864 691 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 EXOC3L4Q17RC7 722 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 LIN9Q5TKA1 542 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 RAD9BQ6WBX8 426 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 GPCPD1Q9NPB8 672 aa18.8■□□□□ 0.6
HMGXB3-201ENST00000502717 AGLP35573 1532 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms