RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 A6NJR5 290 aa16.76■□□□□ 0.27
VARS-228ENST00000495010 TLL1O43897 1013 aa16.76■□□□□ 0.27
VARS-228ENST00000495010 BAIAP3O94812 1187 aa16.76■□□□□ 0.27
VARS-228ENST00000495010 NOVP48745 357 aa16.76■□□□□ 0.27
VARS-228ENST00000495010 RPS6P62753 249 aaKnown RBP16.76■□□□□ 0.27
VARS-228ENST00000495010 TAP1Q03518 808 aa16.76■□□□□ 0.27
VARS-228ENST00000495010 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
VARS-228ENST00000495010 ZBED2Q9BTP6 218 aa16.76■□□□□ 0.27
VARS-228ENST00000495010 SCN5AQ14524 2016 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 FOXP2O15409 715 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 PTGISQ16647 500 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 VPS53Q5VIR6 699 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 CLEC4DQ8WXI8 215 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 COPS5Q92905 334 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 HLA-CQ95604 372 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 HELLSQ9NRZ9 838 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 TCP11L1Q9NUJ3 509 aa16.75■□□□□ 0.27
VARS-228ENST00000495010 EPOPA6NHQ4 379 aa16.74■□□□□ 0.27
VARS-228ENST00000495010 FGRP09769 529 aa16.74■□□□□ 0.27
VARS-228ENST00000495010 PDHBP11177 359 aa16.74■□□□□ 0.27
VARS-228ENST00000495010 ALX1Q15699 326 aa16.74■□□□□ 0.27
VARS-228ENST00000495010 KRT40Q6A162 431 aa16.74■□□□□ 0.27
VARS-228ENST00000495010 CAGE1Q8TC20 777 aa16.74■□□□□ 0.27
VARS-228ENST00000495010 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
VARS-228ENST00000495010 WDR19Q8NEZ3 1342 aa16.73■□□□□ 0.27
VARS-228ENST00000495010 CHD9Q3L8U1 2897 aa16.73■□□□□ 0.27
VARS-228ENST00000495010 EDNRBP24530 442 aa16.73■□□□□ 0.27
VARS-228ENST00000495010 GRB10Q13322 594 aa16.73■□□□□ 0.27
VARS-228ENST00000495010 USH1GQ495M9 461 aa16.73■□□□□ 0.27
VARS-228ENST00000495010 AFAP1L1Q8TED9 768 aa16.73■□□□□ 0.27
VARS-228ENST00000495010 HCN4Q9Y3Q4 1203 aa16.73■□□□□ 0.27
VARS-228ENST00000495010 SCN10AQ9Y5Y9 1956 aa16.72■□□□□ 0.27
VARS-228ENST00000495010 GH1P01241 217 aa16.72■□□□□ 0.27
VARS-228ENST00000495010 FGAP02671 866 aa16.72■□□□□ 0.27
VARS-228ENST00000495010 ZNF543Q08ER8 600 aa16.72■□□□□ 0.27
VARS-228ENST00000495010 MFSD6Q6ZSS7 791 aa16.72■□□□□ 0.27
VARS-228ENST00000495010 SEPT14Q6ZU15 432 aa16.72■□□□□ 0.27
VARS-228ENST00000495010 TTC14Q96N46 770 aa16.72■□□□□ 0.27
VARS-228ENST00000495010 PARNO95453 639 aaKnown RBP16.71■□□□□ 0.27
VARS-228ENST00000495010 SELPP16109 830 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 CASTP20810 708 aaKnown RBP16.71■□□□□ 0.27
VARS-228ENST00000495010 MCMDC2Q4G0Z9 681 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 GPATCH4Q5T3I0 446 aaKnown RBP16.71■□□□□ 0.27
VARS-228ENST00000495010 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 RGS22Q8NE09 1264 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 AFG1LQ8WV93 481 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 EPHX3Q9H6B9 360 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 PRRC2BQ5JSZ5 2229 aaKnown RBP16.71■□□□□ 0.27
VARS-228ENST00000495010 TANC1Q9C0D5 1861 aa16.71■□□□□ 0.27
VARS-228ENST00000495010 NCOR1O75376 2440 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 MUC3AQ02505 3323 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 ARHGEF15O94989 841 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 ARIH2O95376 493 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 MMP3P08254 477 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 HAND2P61296 217 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 WDR5P61964 334 aaKnown RBP16.7■□□□□ 0.26
VARS-228ENST00000495010 LY6KQ17RY6 165 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 TMEM31Q5JXX7 168 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 GDF6Q6KF10 455 aaPredicted RBP16.7■□□□□ 0.26
VARS-228ENST00000495010 CNKSR3Q6P9H4 555 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 LRRC8DQ7L1W4 858 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 C7orf31Q8N865 590 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 LRFN3Q9BTN0 628 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 PCDHB15Q9Y5E8 787 aa16.7■□□□□ 0.26
VARS-228ENST00000495010 GOLGA8HP0CJ92 632 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 HSPD1P10809 573 aaKnown RBP16.69■□□□□ 0.26
VARS-228ENST00000495010 PCP11498 1178 aaKnown RBP16.69■□□□□ 0.26
VARS-228ENST00000495010 STXBP2Q15833 593 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 DGKDQ16760 1214 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 SESTD1Q86VW0 696 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 MCF2L2Q86YR7 1114 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 NSUN6Q8TEA1 469 aaKnown RBP16.69■□□□□ 0.26
VARS-228ENST00000495010 FAM227BQ96M60 508 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 KATNAL1Q9BW62 490 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 UBA5Q9GZZ9 404 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 MAF1Q9H063 256 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 RNF41Q9H4P4 317 aaPredicted RBP16.69■□□□□ 0.26
VARS-228ENST00000495010 ABCB11O95342 1321 aa16.69■□□□□ 0.26
VARS-228ENST00000495010 EFCAB14O75071 495 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 SNHG28P0DPA3 235 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 CCDC62Q6P9F0 684 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 TMCO2Q7Z6W1 182 aaPredicted RBP16.68■□□□□ 0.26
VARS-228ENST00000495010 GDPD5Q8WTR4 605 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 ESR2Q92731 530 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 TAAR1Q96RJ0 339 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 IWS1Q96ST2 819 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 RAD9AQ99638 391 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 ALG1Q9BT22 464 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 MTUS1Q9ULD2 1270 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 ZMYM6O95789 1325 aa16.68■□□□□ 0.26
VARS-228ENST00000495010 A0A0D9SFI3 127 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 ABHD14A-ACY1A0A1B0GW23 586 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 LCHNA4D1U4 455 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
VARS-228ENST00000495010 LPXNO60711 386 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 ARHGAP1Q07960 439 aa16.67■□□□□ 0.26
VARS-228ENST00000495010 IKBKEQ14164 716 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms