RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 MPHOSPH6Q99547 160 aaKnown RBP11.18□□□□□ -0.62
MSH5-218ENST00000494646 TRPV6Q9H1D0 765 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 TBX21Q9UL17 535 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 MRPL11Q9Y3B7 192 aaKnown RBP11.18□□□□□ -0.62
MSH5-218ENST00000494646 RBM8AQ9Y5S9 174 aaKnown RBP11.18□□□□□ -0.62
MSH5-218ENST00000494646 A0A0C4DFX4 3053 aa11.18□□□□□ -0.62
MSH5-218ENST00000494646 TRIP12Q14669 1992 aaPredicted RBP11.17□□□□□ -0.62
MSH5-218ENST00000494646 MYO9BQ13459 2157 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 LOC102724159A0A0B4J2E5 919 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 B4DLN1 442 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 CABYRO75952 493 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 CSF2RAP15509 400 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 EDNRBP24530 442 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 MRPL12P52815 198 aaKnown RBP11.17□□□□□ -0.62
MSH5-218ENST00000494646 CHMP4BP1P59074 171 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 PWP2Q15269 919 aaKnown RBP11.17□□□□□ -0.62
MSH5-218ENST00000494646 TMEM67Q5HYA8 995 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 C16orf59Q7L2K0 433 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 MCF2L2Q86YR7 1114 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 SLC43A3Q8NBI5 491 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 PIBF1Q8WXW3 757 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 RNPC3Q96LT9 517 aaKnown RBP11.17□□□□□ -0.62
MSH5-218ENST00000494646 PIGSQ96S52 555 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 RMDN3Q96TC7 470 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.17□□□□□ -0.622e-7■□□□□ 9.3
MSH5-218ENST00000494646 AMNQ9BXJ7 453 aa11.17□□□□□ -0.62
MSH5-218ENST00000494646 CDH23Q9H251 3354 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 UMODL1Q5DID0 1318 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 B4GALT4O60513 344 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 PPP1R11O60927 126 aaPredicted RBP11.16□□□□□ -0.62
MSH5-218ENST00000494646 ARIH2O95376 493 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 MYCLP12524 364 aaPredicted RBP11.16□□□□□ -0.62
MSH5-218ENST00000494646 EIF2AK2P19525 551 aaKnown RBP11.16□□□□□ -0.62
MSH5-218ENST00000494646 CCL23P55773 120 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 ANTXR2P58335 489 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 GRM4Q14833 912 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 PPP2R5BQ15173 497 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 LY6KQ17RY6 165 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 SLC35G1Q2M3R5 365 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 ARHGEF16Q5VV41 709 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 SLC17A8Q8NDX2 589 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 IGDCC4Q8TDY8 1250 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 NSUN6Q8TEA1 469 aaKnown RBP11.16□□□□□ -0.62
MSH5-218ENST00000494646 SCFD2Q8WU76 684 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 ZFP91Q96JP5 570 aaPredicted RBP11.16□□□□□ -0.62
MSH5-218ENST00000494646 GPHNQ9NQX3 736 aaPredicted RBP11.16□□□□□ -0.62
MSH5-218ENST00000494646 POLR3EQ9NVU0 708 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 PCDHA1Q9Y5I3 950 aa11.16□□□□□ -0.62
MSH5-218ENST00000494646 SCN5AQ14524 2016 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 ZBTB5O15062 677 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 CYTH3O43739 400 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 HOXA13P31271 388 aaPredicted RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 CPT1AP50416 773 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 PURAQ00577 322 aaKnown RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 TROAPQ12815 778 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 COL9A3Q14050 684 aaPredicted RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 TTLL4Q14679 1199 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 SART3Q15020 963 aaKnown RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 STXBP2Q15833 593 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 BRDTQ58F21 947 aaPredicted RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 FAM47CQ5HY64 1035 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 TMEM240Q5SV17 173 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 ZNF697Q5TEC3 545 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 CATIPQ7Z7H3 387 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 TMEM199Q8N511 208 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 MTMR8Q96EF0 704 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 GUCD1Q96NT3 240 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 MTG1Q9BT17 334 aaPredicted RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 LSG1Q9H089 658 aaKnown RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 SEMA6BQ9H3T3 888 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 TRMT13Q9NUP7 481 aaKnown RBP11.15□□□□□ -0.62
MSH5-218ENST00000494646 EYSQ5T1H1 3165 aa11.15□□□□□ -0.62
MSH5-218ENST00000494646 A6NJR5 290 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 GRXCR1A8MXD5 290 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 OPLAHO14841 1288 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 SLC27A2O14975 620 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 NKRFO15226 690 aaKnown RBP eCLIP11.14□□□□□ -0.63
MSH5-218ENST00000494646 SORBS3O60504 671 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 EIF3JO75822 258 aaKnown RBP11.14□□□□□ -0.63
MSH5-218ENST00000494646 NR3C2P08235 984 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 CYP2C9P11712 490 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 PPIGQ13427 754 aaKnown RBP eCLIP11.14□□□□□ -0.633e-7■■■■■ 33.4
MSH5-218ENST00000494646 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
MSH5-218ENST00000494646 NBPF20Q3BBV1 942 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 FAM109BQ6ICB4 259 aaPredicted RBP11.14□□□□□ -0.63
MSH5-218ENST00000494646 CCDC62Q6P9F0 684 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 FCHSD1Q86WN1 690 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 RAB11FIP4Q86YS3 637 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 AFG1LQ8WV93 481 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 SCLYQ96I15 445 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 IWS1Q96ST2 819 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 ESYT1Q9BSJ8 1104 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 MYL10Q9BUA6 226 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 LRRC2Q9BYS8 371 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
MSH5-218ENST00000494646 HIPK3Q9H422 1215 aa11.14□□□□□ -0.63
MSH5-218ENST00000494646 RIOX1Q9H6W3 641 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms