RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 FAM133AQ8N9E0 248 aa18.02■□□□□ 0.48
HPS4-216ENST00000493455 DAGLBQ8NCG7 672 aa18.02■□□□□ 0.48
HPS4-216ENST00000493455 RAET1EQ8TD07 263 aa18.02■□□□□ 0.48
HPS4-216ENST00000493455 APBA2Q99767 749 aa18.02■□□□□ 0.48
HPS4-216ENST00000493455 EHMT1Q9H9B1 1298 aa18.02■□□□□ 0.48
HPS4-216ENST00000493455 SRRDQ9UH36 339 aa18.02■□□□□ 0.48
HPS4-216ENST00000493455 FAM205CA6NFA0 338 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 KIF28PB7ZC32 967 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 STX6O43752 255 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 ALDH5A1P51649 535 aaPredicted RBP18.01■□□□□ 0.47
HPS4-216ENST00000493455 CCL14Q16627 93 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 ZNF792Q3KQV3 632 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 OTOP1Q7RTM1 612 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 FAM177A1Q8N128 213 aaPredicted RBP18.01■□□□□ 0.47
HPS4-216ENST00000493455 SAMD3Q8N6K7 520 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 IPO9Q96P70 1041 aaKnown RBP18.01■□□□□ 0.47
HPS4-216ENST00000493455 PXMP2Q9NR77 195 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 MAP3K20Q9NYL2 800 aaKnown RBP18.01■□□□□ 0.47
HPS4-216ENST00000493455 ADD3Q9UEY8 706 aaKnown RBP18.01■□□□□ 0.47
HPS4-216ENST00000493455 GJD2Q9UKL4 321 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 PCNTO95613 3336 aa18.01■□□□□ 0.47
HPS4-216ENST00000493455 DNAJC25-GNG10A0A024R161 153 aa18■□□□□ 0.47
HPS4-216ENST00000493455 ATP2B1P20020 1258 aa18■□□□□ 0.47
HPS4-216ENST00000493455 CLK2P49760 499 aaKnown RBP18■□□□□ 0.47
HPS4-216ENST00000493455 AP3B2Q13367 1082 aa18■□□□□ 0.47
HPS4-216ENST00000493455 NONOQ15233 471 aaKnown RBP eCLIP18■□□□□ 0.47
HPS4-216ENST00000493455 KRT25Q7Z3Z0 450 aa18■□□□□ 0.47
HPS4-216ENST00000493455 IL31RAQ8NI17 732 aa18■□□□□ 0.47
HPS4-216ENST00000493455 NSUN6Q8TEA1 469 aaKnown RBP18■□□□□ 0.47
HPS4-216ENST00000493455 MAML3Q96JK9 1138 aa18■□□□□ 0.47
HPS4-216ENST00000493455 ASTN1O14525 1302 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 LRRC37A2A6NM11 1700 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 FOSP01100 380 aaPredicted RBP17.99■□□□□ 0.47
HPS4-216ENST00000493455 GNRH1P01148 92 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 ELNP15502 786 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 GHRHRQ02643 423 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 PDE4DQ08499 809 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 PKP1Q13835 747 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 PGM5Q15124 567 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 INF2Q27J81 1249 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 EARS2Q5JPH6 523 aaKnown RBP17.99■□□□□ 0.47
HPS4-216ENST00000493455 EEPD1Q7L9B9 569 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 USP6NLQ92738 828 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 FGD4Q96M96 766 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 MPHOSPH6Q99547 160 aaKnown RBP17.99■□□□□ 0.47
HPS4-216ENST00000493455 FLRT1Q9NZU1 646 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 MTMR6Q9Y217 621 aa17.99■□□□□ 0.47
HPS4-216ENST00000493455 ZNF76P36508 570 aa17.98■□□□□ 0.47
HPS4-216ENST00000493455 ARMCX2Q7L311 632 aa17.98■□□□□ 0.47
HPS4-216ENST00000493455 DNERQ8NFT8 737 aa17.98■□□□□ 0.47
HPS4-216ENST00000493455 TBCKQ8TEA7 893 aa17.98■□□□□ 0.47
HPS4-216ENST00000493455 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
HPS4-216ENST00000493455 PTCH2Q9Y6C5 1203 aa17.98■□□□□ 0.47
HPS4-216ENST00000493455 MYH15Q9Y2K3 1946 aa17.98■□□□□ 0.47
HPS4-216ENST00000493455 ASB14A6NK59 587 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 B4DLN1 442 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 M0R2N6 131 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 ADCY3O60266 1144 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 NR3C2P08235 984 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 CCND2P30279 289 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 FOXD4L6Q3SYB3 417 aaPredicted RBP17.97■□□□□ 0.47
HPS4-216ENST00000493455 MCTP2Q6DN12 878 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 FOXD4L3Q6VB84 417 aaPredicted RBP17.97■□□□□ 0.47
HPS4-216ENST00000493455 CTU1Q7Z7A3 348 aaKnown RBP17.97■□□□□ 0.47
HPS4-216ENST00000493455 NOSTRINQ8IVI9 506 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 TRIB2Q92519 343 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 MAF1Q9H063 256 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 FOXP1Q9H334 677 aaPredicted RBP17.97■□□□□ 0.47
HPS4-216ENST00000493455 RTEL1Q9NZ71 1219 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 KIAA1217Q5T5P2 1943 aa17.97■□□□□ 0.47
HPS4-216ENST00000493455 CYP2C19P33261 490 aa17.96■□□□□ 0.47
HPS4-216ENST00000493455 ARHGAP4P98171 946 aa17.96■□□□□ 0.47
HPS4-216ENST00000493455 FBXO16Q8IX29 292 aaPredicted RBP17.96■□□□□ 0.47
HPS4-216ENST00000493455 TNFRSF25Q93038 417 aa17.96■□□□□ 0.47
HPS4-216ENST00000493455 TINF2Q9BSI4 451 aa17.96■□□□□ 0.47
HPS4-216ENST00000493455 ZHX1Q9UKY1 873 aaPredicted RBP17.96■□□□□ 0.47
HPS4-216ENST00000493455 DIS3Q9Y2L1 958 aaKnown RBP17.96■□□□□ 0.47
HPS4-216ENST00000493455 RPTORQ8N122 1335 aa17.96■□□□□ 0.46
HPS4-216ENST00000493455 HOXC6P09630 235 aa17.95■□□□□ 0.46
HPS4-216ENST00000493455 ZSCAN22P10073 491 aaPredicted RBP17.95■□□□□ 0.46
HPS4-216ENST00000493455 SREBF1P36956 1147 aa17.95■□□□□ 0.46
HPS4-216ENST00000493455 PRMT2P55345 433 aa17.95■□□□□ 0.46
HPS4-216ENST00000493455 TRIM32Q13049 653 aa17.95■□□□□ 0.46
HPS4-216ENST00000493455 LETM2Q2VYF4 491 aa17.95■□□□□ 0.46
HPS4-216ENST00000493455 UIMC1Q96RL1 719 aa17.95■□□□□ 0.46
HPS4-216ENST00000493455 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.95■□□□□ 0.46
HPS4-216ENST00000493455 NOL7Q9UMY1 257 aaKnown RBP17.95■□□□□ 0.46
HPS4-216ENST00000493455 PTPN22Q9Y2R2 807 aa17.95■□□□□ 0.46
HPS4-216ENST00000493455 MYCP01106 439 aaPredicted RBP17.94■□□□□ 0.46
HPS4-216ENST00000493455 XRCC5P13010 732 aaKnown RBP17.94■□□□□ 0.46
HPS4-216ENST00000493455 U2AF2P26368 475 aaKnown RBP eCLIP17.94■□□□□ 0.46
HPS4-216ENST00000493455 IRF5Q13568 498 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 STXBP2Q15833 593 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 PRAMEF19Q5SWL8 479 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 MFSD14CQ5VZR4 134 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 FAM173BQ6P4H8 233 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 SEPT14Q6ZU15 432 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 ZNF467Q7Z7K2 595 aaPredicted RBP17.94■□□□□ 0.46
HPS4-216ENST00000493455 NEK8Q86SG6 692 aa17.94■□□□□ 0.46
HPS4-216ENST00000493455 IWS1Q96ST2 819 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms