RNA–Protein interactions for RNA: ENST00000492886.5

ATG3-206, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-206ENST00000492886 POLR3EQ9NVU0 708 aa16.39■□□□□ 0.21
ATG3-206ENST00000492886 MRPL11Q9Y3B7 192 aaKnown RBP16.39■□□□□ 0.21
ATG3-206ENST00000492886 B4DLN1 442 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 ZBTB5O15062 677 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 CYTH3O43739 400 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 B4GALT4O60513 344 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 CSF2RAP15509 400 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 MRPL12P52815 198 aaKnown RBP16.38■□□□□ 0.21
ATG3-206ENST00000492886 PSMC6P62333 389 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 PPP2R5BQ15173 497 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 SAMD3Q8N6K7 520 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 IGDCC4Q8TDY8 1250 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 NSUN6Q8TEA1 469 aaKnown RBP16.38■□□□□ 0.21
ATG3-206ENST00000492886 VWCEQ96DN2 955 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 IWS1Q96ST2 819 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 AMNQ9BXJ7 453 aa16.38■□□□□ 0.21
ATG3-206ENST00000492886 TTYH1Q9H313 450 aaPredicted RBP16.38■□□□□ 0.21
ATG3-206ENST00000492886 TRIP12Q14669 1992 aaPredicted RBP16.38■□□□□ 0.21
ATG3-206ENST00000492886 TMEM265A0A087WTH1 108 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 ZNF697Q5TEC3 545 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 TMEM199Q8N511 208 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 OR6J1Q8NGC5 347 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 COPS5Q92905 334 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 RMDN3Q96TC7 470 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 MTA3Q9BTC8 594 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 NOC4LQ9BVI4 516 aaKnown RBP16.37■□□□□ 0.21
ATG3-206ENST00000492886 LSG1Q9H089 658 aaKnown RBP16.37■□□□□ 0.21
ATG3-206ENST00000492886 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
ATG3-206ENST00000492886 SEMA6BQ9H3T3 888 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 VAT1LQ9HCJ6 419 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 MAP3K20Q9NYL2 800 aaKnown RBP16.37■□□□□ 0.21
ATG3-206ENST00000492886 RBM8AQ9Y5S9 174 aaKnown RBP16.37■□□□□ 0.21
ATG3-206ENST00000492886 UMODL1Q5DID0 1318 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 CDH23Q9H251 3354 aa16.37■□□□□ 0.21
ATG3-206ENST00000492886 IFIT3O14879 490 aaKnown RBP16.36■□□□□ 0.21
ATG3-206ENST00000492886 TXNP10599 105 aaKnown RBP16.36■□□□□ 0.21
ATG3-206ENST00000492886 CYP2C18P33260 490 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 TTLL4Q14679 1199 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 MTG1Q9BT17 334 aaPredicted RBP16.36■□□□□ 0.21
ATG3-206ENST00000492886 PPP1R12CQ9BZL4 782 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 WNT8AQ9H1J5 351 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 HIPK3Q9H422 1215 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 IL23AQ9NPF7 189 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 PXMP2Q9NR77 195 aa16.36■□□□□ 0.21
ATG3-206ENST00000492886 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
ATG3-206ENST00000492886 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.35■□□□□ 0.21
ATG3-206ENST00000492886 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.35■□□□□ 0.21
ATG3-206ENST00000492886 DHX16O60231 1041 aaKnown RBP16.35■□□□□ 0.21
ATG3-206ENST00000492886 KPNA6O60684 536 aa16.35■□□□□ 0.21
ATG3-206ENST00000492886 ARHGAP1Q07960 439 aa16.35■□□□□ 0.21
ATG3-206ENST00000492886 COL9A3Q14050 684 aaPredicted RBP16.35■□□□□ 0.21
ATG3-206ENST00000492886 WTAPQ15007 396 aa16.35■□□□□ 0.21
ATG3-206ENST00000492886 STXBP2Q15833 593 aa16.35■□□□□ 0.21
ATG3-206ENST00000492886 PSRC1Q6PGN9 363 aaPredicted RBP16.35■□□□□ 0.21
ATG3-206ENST00000492886 RALYLQ86SE5 291 aaKnown RBP16.35■□□□□ 0.21
ATG3-206ENST00000492886 ESYT1Q9BSJ8 1104 aa16.35■□□□□ 0.21
ATG3-206ENST00000492886 PTPRSQ13332 1948 aa16.35■□□□□ 0.21
ATG3-206ENST00000492886 TET1Q8NFU7 2136 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 RGS20O76081 388 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 CFBP00751 764 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 NR3C2P08235 984 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 MYL3P08590 195 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 PTPN11Q06124 597 aaPredicted RBP16.34■□□□□ 0.21
ATG3-206ENST00000492886 NECTIN1Q15223 517 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 NFRKBQ6P4R8 1299 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 ZNF365Q70YC5 407 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 CHST3Q7LGC8 479 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 HERVK_113Q902F9 699 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 EMID1Q96A84 441 aaPredicted RBP16.34■□□□□ 0.21
ATG3-206ENST00000492886 PIGSQ96S52 555 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 PDCD2LQ9BRP1 358 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 LY9Q9HBG7 655 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
ATG3-206ENST00000492886 PCDHA1Q9Y5I3 950 aa16.34■□□□□ 0.21
ATG3-206ENST00000492886 CHD9Q3L8U1 2897 aa16.33■□□□□ 0.21
ATG3-206ENST00000492886 ERICH2A1L162 156 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 EIF3JO75822 258 aaKnown RBP16.33■□□□□ 0.2
ATG3-206ENST00000492886 MMP3P08254 477 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 ACRP10323 421 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 EIF2AK2P19525 551 aaKnown RBP16.33■□□□□ 0.2
ATG3-206ENST00000492886 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
ATG3-206ENST00000492886 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 NBPF20Q3BBV1 942 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 BRDTQ58F21 947 aaPredicted RBP16.33■□□□□ 0.2
ATG3-206ENST00000492886 BMP2KLQ5H9B9 411 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 ARHGEF16Q5VV41 709 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 FAM161BQ96MY7 647 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 CDX2Q99626 313 aaPredicted RBP16.33■□□□□ 0.2
ATG3-206ENST00000492886 TRMT13Q9NUP7 481 aaKnown RBP16.33■□□□□ 0.2
ATG3-206ENST00000492886 FRMPD4Q14CM0 1322 aa16.33■□□□□ 0.2
ATG3-206ENST00000492886 PNMA6FA0A0J9YX94 578 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 GH1P01241 217 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 SUPT20HL2P0C7V6 817 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 HOXD8P13378 290 aaPredicted RBP16.32■□□□□ 0.2
ATG3-206ENST00000492886 DNAJB2P25686 324 aa16.32■□□□□ 0.2
ATG3-206ENST00000492886 SMARCA1P28370 1054 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms